copia-like retrotransposons are ubiquitous among plants
Title | copia-like retrotransposons are ubiquitous among plants |
Publication Type | Journal Articles |
Year of Publication | 1992 |
Authors | Voytas D.F, Cummings MP, Koniczny A., Ausubel F.M, Rodermel S.R |
Journal | Proc Natl Acad Sci USAProc Natl Acad Sci USA |
Volume | 89 |
Abstract | Transposable genetic elements are assumed to be a feature of all eukaryotic genomes. Their identification, however, has largely been haphazard, limited principally to organisms subjected to molecular or genetic scrutiny. We assessed the phylogenetic distribution of copia-like retrotransposons, a class of transposable element that proliferates by reverse transcription, using a polymerase chain reaction assay designed to detect copia-like element reverse transcriptase sequences. copia-like retrotransposons were identified in 64 plant species as well as the photosynthetic protist Volvox carteri. The plant species included representatives from 9 of 10 plant divisions, including bryophytes, lycopods, ferns, gymnosperms, and angiosperms. DNA sequence analysis of 29 cloned PCR products and of a maize retrotransposon cDNA confirmed the identity of these sequences as copia-like reverse transcriptase sequences, thereby demonstrating that this class of retrotransposons is a ubiquitous component of plant genomes. |