Sergey Koren
Publications
2016
2016. Mash: fast genome and metagenome distance estimation using MinHash. Genome Biology. (1Suppl 19)
2016. Diversity in a Polymicrobial Community Revealed by Analysis of Viromes, Endolysins and CRISPR Spacers.. PLoS One. 11(9):e0160574.
2014
2014. The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes. Genome biology. 15:524.
2014. Complete genome sequence of the quality control strain Staphylococcus aureus subsp. aureus ATCC 25923. Genome announcements. 2:e01110–14.
2014. Automated ensemble assembly and validation of microbial genomes.. BMC Bioinformatics. 15:126.
2013
2013. De novo likelihood-based measures for comparing metagenomic assemblies. 2013 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).
2013. De novo likelihood-based measures for comparing genome assemblies. BMC research notes. 6
2011
2011. Bambus 2: Scaffolding Metagenomes. Bioinformatics. 27