Publications
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2008. The Complete Genome Sequence of Thermococcus Onnurineus NA1 Reveals a Mixed Heterotrophic and Carboxydotrophic Metabolism. Journal of BacteriologyJ. Bacteriol.Journal of BacteriologyJ. Bacteriol.. 190
2009. A cooperative combinatorial Particle Swarm Optimization algorithm for side-chain packing. IEEE Swarm Intelligence Symposium, 2009. SIS '09.
2011. A cost-aggregating integer linear program for motif finding. Journal of Discrete AlgorithmsJournal of Discrete Algorithms. 9
2006. A compact mathematical programming formulation for DNA motif finding. Combinatorial Pattern Matching.
2000. Carbonic anhydrase III: the phosphatase activity is extrinsic. Archives of biochemistry and biophysicsArchives of biochemistry and biophysics. 377
2011. A computational statistics approach for estimating the spatial range of morphogen gradients.. Development. 138(22):4867-74.
2011. A computational statistics approach for estimating the spatial range of morphogen gradients. Development. 138(22):4867-4874.
2002. Characterization of Pseudoalteromonas citrea and P. nigrifaciens Isolated from Different Ecological Habitats Based on REP-PCR Genomic Fingerprints. Systematic and Applied MicrobiologySystematic and Applied Microbiology. 25
2004. CHARACTERIZATION OF< i> Ath17, A QUANTITATIVE TRAIT LOCUS FOR ATHEROSCLEROSIS SUSCEPTIBILITY BETWEEN C57BL/6J AND 129S1/SvImJ; SINGLE-NUCLEOTIDE POLYMORPHISMS HAVE IMPORTANT IMPLICATIONS ON IDENTIFYING ATHEROSCLEROSIS MODIFIER GENES. Cardiovascular PathologyCardiovascular Pathology. 13
2005. Critical Factors Influencing the Occurrence of Vibrio Cholerae in the Environment of Bangladesh. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 71
2013. Contribution of nucleosome binding preferences and co-occurring DNA sequences to transcription factor binding. BMC Genomics. 14(1):428.
2010. Comparative Genomics of Clinical and Environmental Vibrio Mimicus. Proceedings of the National Academy of SciencesPNASProceedings of the National Academy of SciencesPNAS. 107
2007. Characterization of Ehp, a Secreted Complement Inhibitory Protein from Staphylococcus aureus. Journal of Biological ChemistryJournal of Biological Chemistry. 282
2006. Conservation Patterns in cis-Elements Reveal Compensatory Mutations. Comparative GenomicsComparative Genomics. 4205
2009. CTCF binding site classes exhibit distinct evolutionary, genomic, epigenomic and transcriptomic features. Genome BiologyGenome Biology. 10
2008. Computational Analysis of Constraints on Noncoding Regions, Coding Regions and Gene Expression in Relation to Plasmodium Phenotypic Diversity. PLoS ONEPLoS ONEPLoS ONEPLoS ONE. 3
2011. Complete Columbian mammoth mitogenome suggests interbreeding with woolly mammoths. Genome biology. 12:R51.
1995. Crystallization and preliminary X-ray investigation of the recombinant Trypanosoma brucei rhodesiense calmodulin. Proteins: Structure, Function, and BioinformaticsProteins: Structure, Function, and Bioinformatics. 21
1995. cDNA expressed sequence tags of Trypanosoma brucei rhodesiense provide new insights into the biology of the parasite. Molecular and Biochemical ParasitologyMolecular and Biochemical Parasitology. 73
2007. Cofactor-independent phosphoglycerate mutase is an essential gene in procyclic form Trypanosoma brucei. Parasitology researchParasitology research. 100