Publications

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A
Alam M, Chowdhury WB, Bhuiyan N.A, Islam A, Hasan NA, G. Nair B, Watanabe H., Siddique A.K, Huq A, R. Sack B et al..  2009.  Serogroup, Virulence, and Genetic Traits of Vibrio Parahaemolyticus in the Estuarine Ecosystem of Bangladesh. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 75
Alam M, Hasan NA, Sadique A, Bhuiyan N.A, Ahmed KU, Nusrin S, G. Nair B, Siddique A.K, R. Sack B, Sack DA et al..  2006.  Seasonal Cholera Caused by Vibrio Cholerae Serogroups O1 and O139 in the Coastal Aquatic Environment of Bangladesh. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 72
B
Baeza J, Dowell JA, Smallegan MJ, Fan J, Amador-Noguez D, Khan Z, Denu JM.  2014.  Stoichiometry of site-specific lysine acetylation in an entire proteome.. J Biol Chem. 289(31):21326-38.
Bartholomeu D., El‐Sayed NM, Melville S.E.  2004.  Sequencing Strategies for Parasite Genomes. METHODS IN MOLECULAR BIOLOGY-CLIFTON THEN TOTOWA-METHODS IN MOLECULAR BIOLOGY-CLIFTON THEN TOTOWA-. 270
Bartholomeu D, El-Sayed NM.  2004.  Sequencing strategies for parasite genomes.. Methods Mol Biol. 270:1-16.
Berry C, Hannenhalli S, Leipzig J, Bushman FD.  2006.  Selection of Target Sites for Mobile DNA Integration in the Human Genome. PLoS Comput BiolPLoS Comput BiolPLoS Comput BiolPLoS Comput Biol. 2
Borah M., Bajwa R.S, Hannenhalli S, Irwin M.J.  1994.  A SIMD solution to the sequence comparison problem on the MGAP. International Conference on Application Specific Array Processors, 1994. Proceedings.
C
Caburlotto G, Haley BJ, Lleò MM, Huq A, Colwell RR.  2010.  Serodiversity and ecological distribution of Vibrio parahaemolyticus in the Venetian Lagoon, Northeast Italy. Environmental Microbiology ReportsEnvironmental Microbiology Reports. 2
Cerqueira GC, Bartholomeu DC, DaRocha WD, Hou L, Freitas-Silva DM, Machado CRenato, El‐Sayed NM, Teixeira SMR.  2008.  Sequence diversity and evolution of multigene families in Trypanosoma cruzi. Molecular and Biochemical ParasitologyMolecular and Biochemical Parasitology. 157
Chazelle B., Kingsford C, Singh M..  2004.  A semidefinite programming approach to side chain positioning with new rounding strategies. INFORMS Journal on ComputingINFORMS Journal on Computing. 16
Choopun N, Louis V, Huq A, Colwell RR.  2002.  Simple Procedure for Rapid Identification of Vibrio Cholerae from the Aquatic Environment. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 68
Colwell RR.  2008.  Silent Sputnik. BioScienceBioScience. 58
Conaty JP.  1973.  Surgery of the hip and knee in patients with rheumatoid arthritis.. J Bone Joint Surg Am. 55(2):301-14.
Consortium HMicrobiome, Treangen T.  2012.  Structure, function and diversity of the healthy human microbiome. Nature. 486:207–214.
Cummings MP, Otto S.P, Wakeley J..  1995.  Sampling properties of DNA sequence data in phylogenetic analysis. Mol Biol EvolMol Biol Evol. 12
Cummings MP, King L.M, Kellogg E.A.  1994.  Slipped-strand mispairing in a plastid gene: ıt rpoC2 in grasses (Poaceae). Mol Biol EvolMol Biol Evol. 11
Cummings MP, Myers D.S.  2004.  Simple statistical models predict C-to-U edited sites in plant mitochondrial RNA. BMC BioinformaticsBMC Bioinformatics. 5
D
Dillon LAL, Suresh R, Okrah K, Bravo HCorrada, Mosser DM, El-Sayed NM.  2015.  Simultaneous transcriptional profiling of Leishmania major and its murine macrophage host cell reveals insights into host-pathogen interactions.. BMC Genomics. 16(1):1108.
Dogan RIslamaj, Getoor L, W Wilbur J, Mount SM.  2007.  SplicePort--an interactive splice-site analysis tool.. Nucleic Acids Res. 35(Web Server issue):W285-91.
Dogan R.I, Getoor L, Wilbur W.J, Mount SM.  2007.  SplicePort--An interactive splice-site analysis tool. Nucleic Acids ResearchNucleic Acids Research. 35
E
el-Sayed NMA, Ghedin E, Song J, MacLeod A, Bringaud F, Larkin C, Wanless D, Peterson J, Hou L, Taylor S et al..  2003.  The sequence and analysis of Trypanosoma brucei chromosome II.. Nucleic Acids Res. 31(16):4856-63.
El-Sayed N.M.A, Donelson J.E..  1997.  Sequencing and mapping the African trypanosome genome. Trypanosomiasis and Leishmaniasis: Biology and Control . :51-63.
El‐Sayed NM, Ghedin E., Song J., MacLeod A., Bringaud F., Larkin C., Wanless D., Peterson J., Hou L., Taylor S. et al..  2003.  The sequence and analysis of Trypanosoma brucei chromosome II. Nucleic acids researchNucleic Acids Research. 31
El‐Sayed NM, Donelson JE.  1997.  A survey of the Trypanosoma brucei rhodesiense genome using shotgun sequencing. Molecular and Biochemical ParasitologyMolecular and Biochemical Parasitology. 84
F
Fermin D.R, Barac A., Lee S., Polster S.P, Hannenhalli S, Bergemann T.L, Grindle S., Dyke D.B, Pagani F., Miller L.W et al..  2008.  Sex and age dimorphism of myocardial gene expression in nonischemic human heart failure. Circulation: Cardiovascular GeneticsCirculation: Cardiovascular Genetics. 1

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