Publications
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Author Title [ Type] Year Filters: Structure-distribution-and-evolution-%C4%B1t-ta1-retrotransposable-element-family-%C4%B1t is [Clear All Filters]
2016. A pathway-centric view of spatial proximity in the 3D nucleome across cell lines. Scientific Reports. 6:39279.
2005. Pathogenic Vibrio species in the marine and estuarine environment. Oceans and health: pathogens in the marine environmentOceans and health: pathogens in the marine environment.
2003. Pathogenic Potential of Environmental Vibrio Cholerae Strains Carrying Genetic Variants of the Toxin-Coregulated Pilus Pathogenicity Island. Infection and ImmunityInfect. Immun.Infection and ImmunityInfect. Immun.. 71
1999. Pathogenic mechanisms in ischemic damage: a computational study. Computers in biology and medicineComputers in biology and medicine. 29
1996. Pathogenesis of schizophrenic delusions and hallucinations: a neural model. Schizophrenia bulletinSchizophrenia Bulletin. 22
2012. The partitioned LASSO-patternsearch algorithm with application to gene expression data. BMC bioinformaticsBMC Bioinformatics. 13
1988. Partial revertants of the transposable element-associated suppressible allele white-apricot in Drosophila melanogaster: structures and responsiveness to genetic modifiers.. Genetics. 118(2):221-34.
2009. Parametric Complexity of Sequence Assembly: Theory and Applications to Next Generation Sequencing. Journal of Computational BiologyJournal of Computational Biology. 16
2004. Pandemic strains of O3:K6 Vibrio parahaemolyticus in the aquatic environment of Bangladesh. Canadian Journal of MicrobiologyCanadian Journal of Microbiology. 50
1994. P element-mediated in vivo deletion analysis of white-apricot: deletions between direct repeats are strongly favored.. Genetics. 136(3):1001-11.
2010. Overcoming bias and systematic errors in next generation sequencing data. Genome medicineGenome medicine. 2
2005. An Outdoor 3-d Visual Tracking System for the Study of Spatial Navigation and Memory in Rhesus Monkeys. Behavior Research Methods,Instruments & Computers. 37(3):453-463.
2006. An optimized system for expression and purification of secreted bacterial proteins. Protein Expression and PurificationProtein Expression and Purification. 46
2010. Occurrence of the Vibrio cholerae seventh pandemic VSP-I island and a new variant. OMICS: A Journal of Integrative BiologyOMICS: A Journal of Integrative Biology. 14
2012. Occurrence of protozoans & their limnological relationships in some ponds of Mathbaria, Bangladesh. University Journal of Zoology, Rajshahi UniversityUniversity Journal of Zoology, Rajshahi University. 29
2008. Occurrence and Expression of Luminescence in Vibrio Cholerae. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 74
2004. Occurrence and distribution of Vibrio cholerae in the coastal environment of Peru. Environmental MicrobiologyEnvironmental Microbiology. 6
1998. Nucleotide sequence diversity at the alcohol dehydrogenase 1 locus in wild barley (ıt Hordeum vulgare ssp. ıt spontaneum): an evaluation of the background selection hypothesis. Proc Natl Acad Sci USAProc Natl Acad Sci USA. 95
2014. A Novel Nutritional Predictor Links Microbial Fastidiousness with Lowered Ubiquity, Growth Rate, and Cooperativeness. PLoS Computational Biology. 10(7):e1003726.
2009. A Novel Heuristic for Local Multiple Alignment of Interspersed DNA Repeats. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 6(2):180-189.
2009. A novel heuristic for local multiple alignment of interspersed DNA repeats. IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB). 6:180–189.
2004. A Note on Efficient Computation of Haplotypes via Perfect Phylogeny. Journal of Computational BiologyJournal of Computational Biology. 11
2011. Next Generation Sequence Assembly with AMOS. Current Protocols in BioinformaticsCurrent Protocols in Bioinformatics. 11
2007. New Trypanosoma cruzi Repeated Element That Shows Site Specificity for Insertion. Eukaryotic CellEukaryotic Cell. 6
2014. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Biology direct. 9:20.