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Khan Z, Balch T, Dellaert F.  2006.  MCMC data association and sparse factorization updating for real time multitarget tracking with merged and multiple measurements.. IEEE Trans Pattern Anal Mach Intell. 28(12):1960-72.
Khan Z, Herman RA, Wallen K, Balch T.  2005.  An outdoor 3-D visual tracking system for the study of spatial navigation and memory in rhesus monkeys.. Behav Res Methods. 37(3):453-63.
Khan Z, Bloom JS, Kruglyak L, Singh M.  2009.  A practical algorithm for finding maximal exact matches in large sequence datasets using sparse suffix arrays.. Bioinformatics. 25(13):1609-16.
Khan Z, Balch T, Dellaert F.  2005.  MCMC-Based Particle Filtering for Tracking a Variable Number of Interacting Targets. IEEE Transactions on Pattern Analysis and Machine Intelligence. 27(11):1805-1918.
Khan Z, Ford MJ, Cusanovich DA, Mitrano A, Pritchard JK, Gilad Y.  2013.  Primate transcript and protein expression levels evolve under compensatory selection pressures.. Science. 342(6162):1100-4.
Khan Z., Ford M.J, Cusanovich D.A, Mitrano A., Pritchard J.K, Gilad Y..  2013.  Primate Transcript and Protein Expression Levels Evolve Under Compensatory Selection Pressures. Science. 342(6162):1100-1104.
Khondker M, Bhuiyan RAhmed, Yeasmin J, Alam M, R. Sack B, Huq A, Colwell RR.  2008.  New records of phytoplankton for Bangladesh. 8. Trachelomonas Ehr. (Euglenophyceae). Bangladesh Journal of BotanyBangladesh Journal of Botany. 37
Khondker M, Bhuiyan RAhmed, Yeasmin J, Alam M, R. Sack B, Huq A, Colwell RR.  2008.  New records of phytoplankton for Bangladesh. 2. Cryptophyceae and Synurophyceae. Bangladesh Journal of BotanyBangladesh Journal of Botany. 36
Khondker M, Bhuiyan RAhmed, Yeasmin J, Alam M, R. Sack B, Huq A, Colwell RR.  2008.  New records of phytoplankton for Bangladesh. 7. Phacus spp. Bangladesh Journal of BotanyBangladesh Journal of Botany. 37
Khondker M, Bhuiyan RAhmed, Yeasmin J, Alam M, R. Sack B, Huq A, Colwell RR.  2008.  New records of phytoplankton for Bangladesh. 5. Euglena, Euglenocapsa. Bangladesh Journal of Plant TaxonomyBangladesh Journal of Plant Taxonomy. 15
Khondker M, Bhuiyan RAhmed, Yeasim J, Alam M, R. Sack B, Huq A, Colwell RR.  2007.  New records of phytoplankton for Bangladesh. 4. Chlorococcales. Bangladesh Journal of Plant TaxonomyBangladesh Journal of Plant Taxonomy. 14
Khondker M, Bhuiyan RAhmed, Yeasmin J, Alam M, R. Sack B, Huq A, Colwell RR.  2009.  New records of phytoplankton for Bangladesh. 9. Some rare and a new species. Bangladesh Journal of Plant TaxonomyBangladesh Journal of Plant Taxonomy. 16
Khondker M, Bhuiyan RAhmed, Yeasmin J, Alam M, R. Sack B, Huq A, Colwell RR.  2007.  New records of phytoplankton for Bangladesh. 3. Volvocales. Bangladesh Journal of Plant TaxonomyBangladesh Journal of Plant Taxonomy. 14
Kim D, Chiurillo MAngel, El-Sayed N, Jones K, Santos MRM, Porcile PE, Andersson B, Myler P, da Silveira JFranco, Ramírez JLuis.  2005.  Telomere and subtelomere of Trypanosoma cruzi chromosomes are enriched in (pseudo)genes of retrotransposon hot spot and trans-sialidase-like gene families: the origins of T. cruzi telomeres.. Gene. 346:153-61.
Kim G., Selengut J., Levine R.L.  2000.  Carbonic anhydrase III: the phosphatase activity is extrinsic. Archives of biochemistry and biophysicsArchives of biochemistry and biophysics. 377
Kim R., Kulkarni P., Hannenhalli S.  2013.  Derepression of Cancer/testis antigens in cancer is associated with distinct patterns of DNA hypomethylation. BMC CancerBMC CancerBMC Cancer. 13:144.
Kim Y, Patro R, Ip CYiu, O'Leary DP, Anishkin A, Sukharev S, Varshney A.  2009.  Salient Frame Detection for Molecular Dynamics Simulations. Scientific VisualizationScientific Visualization.
Kimes NE, Grim CJ, Johnson WR, Hasan NA, Tall BD, Kothary MH, Kiss H, A. Munk C, Tapia R, Green L et al..  2011.  Temperature regulation of virulence factors in the pathogen Vibrio coralliilyticus. The ISME JournalThe ISME journal. 6
King L.M, Cummings MP.  1997.  Satellite DNA repeat sequence variation is low in three species of burying beetles in the genus ıt Nicrophorus (Coleoptera: Silphidae). Mol Biol EvolMol Biol Evol. 14
Kingsford C, Salzberg S.L.  2008.  What are decision trees? Nature biotechnologyNature biotechnology. 26
Kingsford C, Marçais G..  2009.  A synthesis for exactly 3-edge-connected graphs. Arxiv preprint arXiv:0905.1053Arxiv preprint arXiv:0905.1053.
Kingsford C, Delcher A.L, Salzberg S.L.  2007.  A unified model explaining the offsets of overlapping and near-overlapping prokaryotic genes. Molecular biology and evolutionMolecular biology and evolution. 24
Kingsford C, Nagarajan N, Salzberg SL.  2009.  2009 Swine-Origin Influenza A (H1N1) Resembles Previous Influenza Isolates. PLoS ONEPLoS ONEPLoS ONEPLoS ONE. 4
Kingsford C, Schatz M., Pop M..  2010.  Assembly complexity of prokaryotic genomes using short reads. BMC bioinformaticsBMC Bioinformatics. 11
Kingsford C, Zaslavsky E., Singh M..  2006.  A compact mathematical programming formulation for DNA motif finding. Combinatorial Pattern Matching.

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