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P

Pruzzo C., Huq A., Colwell RR, Donelli G.. 2005. Pathogenic Vibrio species in the marine and estuarine environment. Oceans and health: pathogens in the marine environmentOceans and health: pathogens in the marine environment.

Pruzzo C, Tarsi R, Lleò MDel Mar, Signoretto C, Zampini M, Pane L, Colwell RR, Canepari P. 2003. Persistence of adhesive properties in Vibrio cholerae after long‐term exposure to sea water. Environmental MicrobiologyEnvironmental Microbiology. 5

R

Ruppin E., Ofer E., Reggia JA, Revett K.. 1999. Pathogenic mechanisms in ischemic damage: a computational study. Computers in biology and medicineComputers in biology and medicine. 29

Ruppin E., Reggia JA, Horn D.. 1996. Pathogenesis of schizophrenic delusions and hallucinations: a neural model. Schizophrenia bulletinSchizophrenia Bulletin. 22

Ruppin E., Reggia JA. 1995. Patterns of functional damage in neural network models of associative memory. Neural computationNeural computation. 7

Ruppin E., Revett K., Ofer E., Goodall S., Reggia JA. 1999. Penumbral tissue damage following acute stroke: a computational investigation. Progress in brain researchProgress in brain research. 121

S

Shi W, Wahba G, Irizarry RA, Bravo HCorrada, Wright SJ. 2012. The partitioned LASSO-patternsearch algorithm with application to gene expression data. BMC bioinformaticsBMC Bioinformatics. 13

Simola D.F, Dalva M., Hannenhalli S, Liebhaber S., Bucan M., Ungar L.. 2005. Post-transcriptional Control in Mammalian Dendrites.

Snellman EA, Sullivan ER, Colwell RR. 2002. Purification and properties of the extracellular lipase, LipA, of Acinetobacter sp. RAG‐1. European Journal of BiochemistryEuropean Journal of Biochemistry. 269

V

Vardhanabhuti S, Wang J, Hannenhalli S. 2007. Position and distance specificity are important determinants of cis-regulatory motifs in addition to evolutionary conservation. Nucleic Acids ResearchNucleic Acids Research. 35

W

Wagner J, Paulson JN, Wang X, Bhattacharjee B, Bravo éctorCorrada. 2016. Privacy-Preserving Microbiome Analysis Using Secure Computation. Bioinformatics. :btw073.

Wagner J, Paulson JN, Wang X-S, Bhattacharjee B, Bravo HCorrada. 2015. Privacy-Preserving Microbiome Analysis Using Secure Computation.

Waisberg M, Cerqueira GC, Yager SB, Francischetti IMB, Lu J, Gera N, Srinivasan P, Miura K, Rada B, Lukszo J et al.. 2012. Plasmodium falciparum merozoite surface protein 1 blocks the proinflammatory protein S100P.. Proc Natl Acad Sci U S A. 109(14):5429-34.

Wang K, Das A, Xiong Z-M, Cao K, Hannenhalli S. 2015. Phenotype-Dependent Coexpression Gene Clusters: Application to Normal and Premature Ageing. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 12(1):30-39.

Y

Yizhak K, Gaude E, Le Dévédec S, Waldman YY, Stein GY, van de Water B, Frezza C, Ruppin E. 2014. Phenotype-based cell-specific metabolic modeling reveals metabolic liabilities of cancer.. Elife. 3

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