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Ruppin E., Revett K., Ofer E., Goodall S., Reggia JA. 1999. Penumbral tissue damage following acute stroke: a computational investigation. Progress in brain researchProgress in brain research. 121

Hadley D., Murphy T., Valladares O., Hannenhalli S, Ungar L., Kim J., Bucan M.,. 2006. Patterns of sequence conservation in presynaptic neural genes. Genome BiolGenome Biol. 7

Ruppin E., Reggia JA. 1995. Patterns of functional damage in neural network models of associative memory. Neural computationNeural computation. 7

Cummings MP. 1992. Patterns and processes of sequence evolution: plant organelle genomes and copia-like retrotransposons.

Karathia H, Kingsford C, Girvan M, Hannenhalli S. 2016. A pathway-centric view of spatial proximity in the 3D nucleome across cell lines. Scientific Reports. 6:39279.

Pruzzo C., Huq A., Colwell RR, Donelli G.. 2005. Pathogenic Vibrio species in the marine and estuarine environment. Oceans and health: pathogens in the marine environmentOceans and health: pathogens in the marine environment.

Faruque SM, Kamruzzaman M., Meraj IM, Chowdhury N, G. Nair B, R. Sack B, Colwell RR, Sack DA. 2003. Pathogenic Potential of Environmental Vibrio Cholerae Strains Carrying Genetic Variants of the Toxin-Coregulated Pilus Pathogenicity Island. Infection and ImmunityInfect. Immun.Infection and ImmunityInfect. Immun.. 71

Ruppin E., Ofer E., Reggia JA, Revett K.. 1999. Pathogenic mechanisms in ischemic damage: a computational study. Computers in biology and medicineComputers in biology and medicine. 29

Ruppin E., Reggia JA, Horn D.. 1996. Pathogenesis of schizophrenic delusions and hallucinations: a neural model. Schizophrenia bulletinSchizophrenia Bulletin. 22

Shi W, Wahba G, Irizarry RA, Bravo HCorrada, Wright SJ. 2012. The partitioned LASSO-patternsearch algorithm with application to gene expression data. BMC bioinformaticsBMC Bioinformatics. 13

Mount SM, Green MM, Rubin GM. 1988. Partial revertants of the transposable element-associated suppressible allele white-apricot in Drosophila melanogaster: structures and responsiveness to genetic modifiers.. Genetics. 118(2):221-34.

Nagarajan N, Pop M.. 2009. Parametric Complexity of Sequence Assembly: Theory and Applications to Next Generation Sequencing. Journal of Computational BiologyJournal of Computational Biology. 16

Hua K.A, Hannenhalli S. 1991. Parallel transitive closure computations using topological sort. Proceedings of the First International Conference on Parallel and Distributed Information Systems, 1991.

Islam M.S, Tasmin R, Khan SI s l a m, Bakht HBM, Mahmood ZH a y a t, Rahman M.Z i a u r, Bhuiyan NA m i n, Nishibuchi M, Nair G.B a l a k, e y Sack R.B r a d l et al.. 2004. Pandemic strains of O3:K6 Vibrio parahaemolyticus in the aquatic environment of Bangladesh. Canadian Journal of MicrobiologyCanadian Journal of Microbiology. 50

Kurkulos M, Weinberg JM, Roy D, Mount SM. 1994. P element-mediated in vivo deletion analysis of white-apricot: deletions between direct repeats are strongly favored.. Genetics. 136(3):1001-11.

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