Publications
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2011. Predicting selective drug targets in cancer through metabolic networks.. Mol Syst Biol. 7:501.
2011. ProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological process. BMC bioinformaticsBMC Bioinformatics. 12
2011. ProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological process.. BMC Bioinformatics. 12:434.
2011. Repetitive DNA and next-generation sequencing: computational challenges and solutions. Nature Reviews Genetics.
2011. Role of Zooplankton Diversity in Vibrio Cholerae Population Dynamics and in the Incidence of Cholera in the Bangladesh Sundarbans. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 77
2011. Suppression subtractive hybridization PCR isolation of cDNAs from a Caribbean soft coral. Electronic Journal of BiotechnologyElectronic Journal of Biotechnology. 14
2011. Suppression subtractive hybridization PCR isolation of cDNAs from a Caribbean soft coral. Electronic Journal of BiotechnologyElectronic Journal of Biotechnology. 14
2012. AGORA: Assembly Guided by Optical Restriction Alignment. BMC bioinformaticsBMC Bioinformatics. 13
2012. Archaeosortases and exosortases are widely distributed systems linking membrane transit with posttranslational modification. Journal of bacteriologyJournal of bacteriology. 194
2012. Archaeosortases and exosortases are widely distributed systems linking membrane transit with posttranslational modification.. J Bacteriol. 194(1):36-48.
2012. BclAF1 restriction factor is neutralized by proteasomal degradation and microRNA repression during human cytomegalovirus infection. Proceedings of the National Academy of Sciences. 109(24):9575-9580.
2012. BclAF1 restriction factor is neutralized by proteasomal degradation and microRNA repression during human cytomegalovirus infection. Proceedings of the National Academy of Sciences. 109(24):9575-9580.
2012. BclAF1 restriction factor is neutralized by proteasomal degradation and microRNA repression during human cytomegalovirus infection. Proceedings of the National Academy of Sciences. 109(24):9575-9580.
2012. BclAF1 restriction factor is neutralized by proteasomal degradation and microRNA repression during human cytomegalovirus infection. Proceedings of the National Academy of Sciences. 109(24):9575-9580.
2012. BclAF1 restriction factor is neutralized by proteasomal degradation and microRNA repression during human cytomegalovirus infection.. Proc Natl Acad Sci U S A. 109(24):9575-80.
2012. BclAF1 restriction factor is neutralized by proteasomal degradation and microRNA repression during human cytomegalovirus infection.. Proc Natl Acad Sci U S A. 109(24):9575-80.
2012. BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics. Systematic BiologySyst BiolSystematic BiologySyst Biol. 61
2012. BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics. Systematic BiologySyst BiolSystematic BiologySyst Biol. 61
2012. Bioinformatics for the Human Microbiome Project. PLOS Computational BiologyPLOS Computational Biology. 8
2012. Deep Sequencing of the Oral Microbiome Reveals Signatures of Periodontal Disease. PloS onePLoS One. 7
2012. GAGE: A critical evaluation of genome assemblies and assembly algorithms. Genome researchGenome Research. 22
2012. GAGE: A critical evaluation of genome assemblies and assembly algorithms. Genome researchGenome Research. 22
2012. Gene Prediction with Glimmer for Metagenomic Sequences Augmented by Classification and Clustering. Nucleic Acids ResearchNucl. Acids Res.Nucleic Acids ResearchNucl. Acids Res.. 40
2012. Genomic analysis of ICEVchBan8: An atypical genetic element in Vibrio cholerae. FEBS LettersFEBS Letters.
2012. Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage.. ISME J. 6(6):1186-99.