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Journal Articles
Badger JH, Hoover TR, Brun YV, Weiner RM, Laub MT, Alexandre G, Mrázek J, Ren Q, Paulsen IT, Nelson KE et al..  2006.  Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus. Journal of bacteriologyJournal of bacteriology. 188
Hotopp JCDunning, Lin M, Madupu R, Crabtree J, Angiuoli SV, Eisen JA, Eisen J, Seshadri R, Ren Q, Wu M et al..  2006.  Comparative genomics of emerging human ehrlichiosis agents. PLoS geneticsPLoS genetics. 2
El‐Sayed NM, Myler PJ, Blandin G, Berriman M, Crabtree J, Aggarwal G, Caler E, Renauld H, Worthey EA, Hertz-Fowler C et al..  2005.  Comparative Genomics of Trypanosomatid Parasitic Protozoa. ScienceScience. 309
Chun J., Grim C.J, Hasan N.A, Lee J.H, Choi S.Y, Haley B.J, Taviani E., Jeon Y.S, Kim D.W, Lee J.H et al..  2009.  Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae. Proceedings of the National Academy of SciencesProceedings of the National Academy of Sciences. 106
Seshadri R, Myers GSA, Tettelin H, Eisen JA, Heidelberg JF, Dodson RJ, Davidsen TM, DeBoy RT, Fouts DE, Haft DH et al..  2004.  Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes. Proceedings of the National Academy of Sciences of the United States of AmericaProceedings of the National Academy of Sciences of the United States of America. 101
Enk J, Devault A, Debruyne R, King CE, Treangen T, O'Rourke D, Salzberg SL, Fisher D, MacPhee R, Poinar H.  2011.  Complete Columbian mammoth mitogenome suggests interbreeding with woolly mammoths. Genome biology. 12:R51.
Di Bonaventura MPia, DeSalle R, Pop M., Nagarajan N, Figurski DH, Fine DH, Kaplan JB, Planet PJ.  2009.  Complete Genome Sequence of Aggregatibacter (Haemophilus) Aphrophilus NJ8700. Journal of BacteriologyJ. Bacteriol.Journal of BacteriologyJ. Bacteriol.. 191
C. Buell R, Joardar V, Lindeberg M, Selengut J., Paulsen IT, Gwinn ML, Dodson RJ, DeBoy RT, A. Durkin S, Kolonay JF et al..  2003.  The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Proceedings of the National Academy of Sciences of the United States of AmericaProceedings of the National Academy of Sciences of the United States of America. 100
C. Buell R, Joardar V, Lindeberg M, Selengut J., Paulsen IT, Gwinn ML, Dodson RJ, DeBoy RT, A. Durkin S, Kolonay JF et al..  2003.  The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Proceedings of the National Academy of Sciences of the United States of AmericaProceedings of the National Academy of Sciences of the United States of America. 100
Treangen TJ, Maybank RA, Enke S, Friss MBeth, Diviak LF, Karaolis DKR, Koren S, Ondov B, Phillippy AM, Bergman NH.  2014.  Complete genome sequence of the quality control strain Staphylococcus aureus subsp. aureus ATCC 25923. Genome announcements. 2:e01110–14.
Treangen TJ, Maybank RA, Enke S, Friss MBeth, Diviak LF, Karaolis DKR, Koren S, Ondov B, Phillippy AM, Bergman NH.  2014.  Complete genome sequence of the quality control strain Staphylococcus aureus subsp. aureus ATCC 25923. Genome announcements. 2:e01110–14.
Lee HSook, Kang SGyun, Bae SSeob, Lim JKyu, Cho Y, Kim YJae, Jeon JHo, Cha S-S, Kwon KKyoung, Kim H-T et al..  2008.  The Complete Genome Sequence of Thermococcus Onnurineus NA1 Reveals a Mixed Heterotrophic and Carboxydotrophic Metabolism. Journal of BacteriologyJ. Bacteriol.Journal of BacteriologyJ. Bacteriol.. 190
Lee HSook, Kang SGyun, Bae SSeob, Lim JKyu, Cho Y, Kim YJae, Jeon JHo, Cha S-S, Kwon KKyoung, Kim H-T et al..  2008.  The Complete Genome Sequence of Thermococcus Onnurineus NA1 Reveals a Mixed Heterotrophic and Carboxydotrophic Metabolism. Journal of BacteriologyJ. Bacteriol.Journal of BacteriologyJ. Bacteriol.. 190
Lee HSook, Kang SGyun, Bae SSeob, Lim JKyu, Cho Y, Kim YJae, Jeon JHo, Cha S-S, Kwon KKyoung, Kim H-T et al..  2008.  The Complete Genome Sequence of Thermococcus Onnurineus NA1 Reveals a Mixed Heterotrophic and Carboxydotrophic Metabolism. Journal of BacteriologyJ. Bacteriol.Journal of BacteriologyJ. Bacteriol.. 190
Lee HSook, Kang SGyun, Bae SSeob, Lim JKyu, Cho Y, Kim YJae, Jeon JHo, Cha S-S, Kwon KKyoung, Kim H-T et al..  2008.  The Complete Genome Sequence of Thermococcus Onnurineus NA1 Reveals a Mixed Heterotrophic and Carboxydotrophic Metabolism. Journal of BacteriologyJ. Bacteriol.Journal of BacteriologyJ. Bacteriol.. 190
Lee HSook, Kang SGyun, Bae SSeob, Lim JKyu, Cho Y, Kim YJae, Jeon JHo, Cha S-S, Kwon KKyoung, Kim H-T et al..  2008.  The Complete Genome Sequence of Thermococcus Onnurineus NA1 Reveals a Mixed Heterotrophic and Carboxydotrophic Metabolism. Journal of BacteriologyJ. Bacteriol.Journal of BacteriologyJ. Bacteriol.. 190
Lee HSook, Kang SGyun, Bae SSeob, Lim JKyu, Cho Y, Kim YJae, Jeon JHo, Cha S-S, Kwon KKyoung, Kim H-T et al..  2008.  The Complete Genome Sequence of Thermococcus Onnurineus NA1 Reveals a Mixed Heterotrophic and Carboxydotrophic Metabolism. Journal of BacteriologyJ. Bacteriol.Journal of BacteriologyJ. Bacteriol.. 190
Choi J.H, Tang H., Kim S., Pop M..  2010.  Computational Approaches for Genome Assembly Validation. Biological Data MiningBiological Data Mining.
Leparc G.G, Mitra R.D, Vardhanabhuti S., Wang J., Hannenhalli S, Smit S., Widmann J., Knight R., Wu S., Zhang Y. et al..  2007.  COMPUTATIONAL BIOLOGY. Nucleic acids researchNucleic Acids Research. 35
Kanodia JS, Kim Y, Tomer R, Khan Z, Chung K, Storey JD, Lu H, Keller PJ, Shvartsman SY.  2011.  A computational statistics approach for estimating the spatial range of morphogen gradients.. Development. 138(22):4867-74.
Kanodia JS, Kim Y, Tomer R, Khan Z, Chung K, Storey JD, Lu H, Keller PJ, Shvartsman SY.  2011.  A computational statistics approach for estimating the spatial range of morphogen gradients.. Development. 138(22):4867-74.
Kanodia JS, Kim Y, Tomer R, Khan Z, Chung K, Storey JD, Lu H, Keller PJ, Shvartsman SY.  2011.  A computational statistics approach for estimating the spatial range of morphogen gradients.. Development. 138(22):4867-74.
Kanodia JS, Kim Y, Tomer R, Khan Z, Chung K, Storey JD, Lu H, Keller PJ, Shvartsman SY.  2011.  A computational statistics approach for estimating the spatial range of morphogen gradients.. Development. 138(22):4867-74.
Almeida M, Hebert A, Abraham A-L, Rasmussen S, Monnet C, Pons N, Delbes C, Loux V, Batto J-M, Leonard P et al..  2014.  Construction of a dairy microbial genome catalog opens new perspectives for the metagenomic analysis of dairy fermented products. BMC GenomicsBMC Genomics. 15:1101.
Senoh M, Ghosh‐Banerjee J, Ramamurthy T, Hamabata T, Kurakawa T, Takeda M, Colwell RR, G. Nair B, Takeda Y.  2010.  Conversion of viable but nonculturable Vibrio cholerae to the culturable state by co‐culture with eukaryotic cells. Microbiology and ImmunologyMicrobiology and Immunology. 54

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