Publications
Export 65 results:
[ Author] Title Type Year Filters: First Letter Of Title is P [Clear All Filters]
1996. Polynomial-time algorithm for computing translocation distance between genomes. Discrete Applied MathematicsDiscrete Applied Mathematics. 71
1995. Polynomial-time algorithm for computing translocation distance between genomes. Combinatorial Pattern MatchingCombinatorial Pattern Matching.
1991. Parallel transitive closure computations using topological sort. Proceedings of the First International Conference on Parallel and Distributed Information Systems, 1991.
2004. Pandemic strains of O3:K6 Vibrio parahaemolyticus in the aquatic environment of Bangladesh. Canadian Journal of MicrobiologyCanadian Journal of Microbiology. 50
2014. Predicting cancer-specific vulnerability via data-driven detection of synthetic lethality.. Cell. 158(5):1199-209.
2016. A pathway-centric view of spatial proximity in the 3D nucleome across cell lines. Scientific Reports. 6:39279.
2009. A practical algorithm for finding maximal exact matches in large sequence datasets using sparse suffix arrays.. Bioinformatics. 25(13):1609-16.
2009. Protein quantification across hundreds of experimental conditions. Proceedings of the National Academy of Sciences. 106(37):15544-15548.
2009. Protein quantification across hundreds of experimental conditions.. Proc Natl Acad Sci U S A. 106(37):15544-8.
2013. Primate Transcript and Protein Expression Levels Evolve Under Compensatory Selection Pressures. Science. 342(6162):1100-1104.
2013. Primate transcript and protein expression levels evolve under compensatory selection pressures.. Science. 342(6162):1100-4.
2009. A practical algorithm for finding maximal exact matches in large sequence datasets using sparse suffix arrays. Bioinformatics. 25(13):1609-1616.
1994. P element-mediated in vivo deletion analysis of white-apricot: deletions between direct repeats are strongly favored.. Genetics. 136(3):1001-11.
1991. Polyadenylylation in copia requires unusually distant upstream sequences.. Proc Natl Acad Sci U S A. 88(8):3038-42.
2003. Predictability of Vibrio Cholerae in Chesapeake Bay. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 69
2009. Parametric Complexity of Sequence Assembly: Theory and Applications to Next Generation Sequencing. Journal of Computational BiologyJournal of Computational Biology. 16
2010. The power of protein interaction networks for associating genes with diseases. BioinformaticsBioinformatics. 26
2016. A perspective on 16S rRNA operational taxonomic unit clustering using sequence similarity. npj Biofilms and Microbiomes. 2:16004.
2005. Promoter architecture and response to a positive regulator of archaeal transcription. Molecular MicrobiologyMolecular Microbiology. 56
2015. Proteomics-based metabolic modeling reveals that fatty acid oxidation (FAO) controls endothelial cell (EC) permeability.. Mol Cell Proteomics. 14(3):621-34.
2016. Positive and strongly relaxed purifying selection drive the evolution of repeats in proteins. Nature Communications. 7:13570.