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Chelaru F, Smith L, Goldstein N, Bravo HCorrada. 2014. Epiviz: interactive visual analytics for functional genomics data.. Nat Methods. 11(9):938-40.

G. de Magny C, Murtugudde R., Sapiano M.RP, Nizam A., Brown C.W, Busalacchi A.J, Yunus M., Nair G.B, Gil A.I, Lanata C.F et al.. 2008. Environmental signatures associated with cholera epidemics. Proceedings of the National Academy of SciencesProceedings of the National Academy of Sciences. 105

Field D, Garrity G, Morrison N, Selengut J., Sterk P, Tatusova T, Thomson N. 2005. eGenomics: Cataloguing our Complete Genome Collection. Comparative and functional genomicsComparative and functional genomics. 6

Pop M., Duncan C, Barequet G, Goodrich M, Huang W, Kumar S. 2001. Efficient perspective-accurate silhouette computation and applications. Proceedings of the seventeenth annual symposium on Computational geometry.

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Vezzulli L, Guzmán CA, Colwell RR, Pruzzo C. 2008. Dual role colonization factors connecting Vibrio cholerae's lifestyles in human and aquatic environments open new perspectives for combating infectious diseases. Current Opinion in BiotechnologyCurrent Opinion in Biotechnology. 19

Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KLT et al.. 2008. The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).. Nature. 452(7190):991-6.

Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KLT et al.. 2008. The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).. Nature. 452(7190):991-6.

Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KLT et al.. 2008. The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).. Nature. 452(7190):991-6.

Ghedin E., Wang S., Spiro D., Caler E., Zhao Q., Crabtree J., Allen J.E, Delcher A.L, Guiliano D.B, Miranda-Saavedra D. et al.. 2007. Draft genome of the filarial nematode parasite Brugia malayi. ScienceScience. 317

Ghedin E., Wang S., Spiro D., Caler E., Zhao Q., Crabtree J., Allen J.E, Delcher A.L, Guiliano D.B, Miranda-Saavedra D. et al.. 2007. Draft genome of the filarial nematode parasite Brugia malayi. ScienceScience. 317

Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, De Tomaso A, Davidson B, Di Gregorio A, Gelpke M, Goodstein DM et al.. 2002. The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins.. Science. 298(5601):2157-67.

Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, De Tomaso A, Davidson B, Di Gregorio A, Gelpke M, Goodstein DM et al.. 2002. The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins.. Science. 298(5601):2157-67.

Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, De Tomaso A, Davidson B, Di Gregorio A, Gelpke M, Goodstein DM et al.. 2002. The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins.. Science. 298(5601):2157-67.

Ghodsi M, Liu B, Pop M.. 2011. DNACLUST: accurate and efficient clustering of phylogenetic marker genes. BMC BioinformaticsBMC Bioinformatics. 12

Zo Y-G, Chokesajjawatee N, Grim C, Arakawa E, Watanabe H, Colwell RR. 2009. Diversity and Seasonality of Bioluminescent Vibrio Cholerae Populations in Chesapeake Bay. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 75

Taviani E, Grim CJ, Choi J, Jongsik C, Haley B, Hasan NA, Huq A, Colwell RR. 2010. Discovery of novel Vibrio cholerae VSP‐II genomic islands using comparative genomic analysis. FEMS Microbiology LettersFEMS Microbiology Letters. 308

Korpal M, Ell BJ, Buffa FM, Ibrahim T, Blanco MA, Celià-Terrassa T, Mercatali L, Khan Z, Goodarzi H, Hua Y et al.. 2011. Direct targeting of Sec23a by miR-200s influences cancer cell secretome and promotes metastatic colonization.. Nat Med. 17(9):1101-8.

Korpal M, Ell BJ, Buffa FM, Ibrahim T, Blanco MA, Celià-Terrassa T, Mercatali L, Khan Z, Goodarzi H, Hua Y et al.. 2011. Direct targeting of Sec23a by miR-200s influences cancer cell secretome and promotes metastatic colonization.. Nat Med. 17(9):1101-8.

Korpal M, Ell BJ, Buffa FM, Ibrahim T, Blanco MA, Terrassa Tà-, Mercatali L, Khan Z, Goodarzi H, Hua Y et al.. 2011. Direct targeting of Sec23a by miR-200s influences cancer cell secretome and promotes metastatic colonization. Nature Medicine. 17(9):1101-1108.

Korpal M, Ell BJ, Buffa FM, Ibrahim T, Blanco MA, Terrassa Tà-, Mercatali L, Khan Z, Goodarzi H, Hua Y et al.. 2011. Direct targeting of Sec23a by miR-200s influences cancer cell secretome and promotes metastatic colonization. Nature Medicine. 17(9):1101-1108.

Lipp EK, Rivera ING, Gil AI, Espeland EM, Choopun N, Louis VR, Russek-Cohen E, Huq A, Colwell RR. 2003. Direct Detection of Vibrio Cholerae and ctxA in Peruvian Coastal Water and Plankton by PCR. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 69

Grim CJ, Jaiani E, Whitehouse CA, Janelidze N, Kokashvili T, Tediashvili M, Colwell RR, Huq A. 2009. Detection of toxigenic Vibrio cholerae O1 in freshwater lakes of the former Soviet Republic of Georgia. Environmental Microbiology ReportsEnvironmental Microbiology Reports. 2

Huq A, Grim C, Colwell RR, G. Nair B. 2006. Detection, Isolation, and Identification of Vibrio cholerae from the Environment. Current Protocols in MicrobiologyCurrent Protocols in Microbiology.

Liu B., Faller L.L, Klitgord N., Mazumdar V., Ghodsi M., Sommer D.D, Gibbons T.R, Treangen T, Chang Y.C, Li S. et al.. 2012. Deep Sequencing of the Oral Microbiome Reveals Signatures of Periodontal Disease. PloS onePLoS One. 7

Liu B., Faller L.L, Klitgord N., Mazumdar V., Ghodsi M., Sommer D.D, Gibbons T.R, Treangen T, Chang Y.C, Li S. et al.. 2012. Deep Sequencing of the Oral Microbiome Reveals Signatures of Periodontal Disease. PloS onePLoS One. 7

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