Publications
2011. Warming Oceans, Phytoplankton, and River Discharge: Implications for Cholera Outbreaks. The American Journal of Tropical Medicine and HygieneAm J Trop Med HygThe American Journal of Tropical Medicine and HygieneAm J Trop Med Hyg. 85
2004. Lecture Notes in Computer ScienceComputer Vision - ECCV 2004An MCMC-Based Particle Filter for Tracking Multiple Interacting Targets. 3024:279-290.
2011. A computational statistics approach for estimating the spatial range of morphogen gradients. Development. 138(22):4867-4874.
2011. A computational statistics approach for estimating the spatial range of morphogen gradients.. Development. 138(22):4867-74.
2016. A pathway-centric view of spatial proximity in the 3D nucleome across cell lines. Scientific Reports. 6:39279.
2011. Increased gene sampling provides stronger support for higher-level groups within gracillariid leaf mining moths and relatives (Lepidoptera: Gracillariidae). BMC Evol BiolBMC Evol Biol. 11:182
2006. Differential Transcriptional Response to Nonassociative and Associative Components of Classical Fear Conditioning in the Amygdala and Hippocampus. Learning & MemoryLearn. Mem.Learning & MemoryLearn. Mem.. 13
2012. Gene Prediction with Glimmer for Metagenomic Sequences Augmented by Classification and Clustering. Nucleic Acids ResearchNucl. Acids Res.Nucleic Acids ResearchNucl. Acids Res.. 40
2011. Extracting Between-Pathway Models from E-MAP Interactions Using Expected Graph Compression. Journal of Computational BiologyJournal of Computational Biology. 18
2012. Functional Divergence of Gene Duplicates a Domain-centric view. BMC Evolutionary BiologyBMC Evolutionary Biology.
2013. Primate Transcript and Protein Expression Levels Evolve Under Compensatory Selection Pressures. Science. 342(6162):1100-1104.
2003. Efficient particle filter-based tracking of multiple interacting targets using an mrf-based motion model. 2003 IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS 2003) (Cat. No.03CH37453)Proceedings 2003 IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS 2003) (Cat. No.03CH37453).
2014. Quantitative 4D analyses of epithelial folding during Drosophila gastrulation.. Development. 141(14):2895-900.
2011. Accurate proteome-wide protein quantification from high-resolution 15N mass spectra. Genome Biology. 12(12):R122.
2011. Accurate proteome-wide protein quantification from high-resolution 15N mass spectra.. Genome Biol. 12(12):R122.
2005. An Outdoor 3-d Visual Tracking System for the Study of Spatial Navigation and Memory in Rhesus Monkeys. Behavior Research Methods,Instruments & Computers. 37(3):453-463.
2005. An outdoor 3-D visual tracking system for the study of spatial navigation and memory in rhesus monkeys.. Behav Res Methods. 37(3):453-63.
2009. A practical algorithm for finding maximal exact matches in large sequence datasets using sparse suffix arrays. Bioinformatics. 25(13):1609-1616.
2009. A practical algorithm for finding maximal exact matches in large sequence datasets using sparse suffix arrays.. Bioinformatics. 25(13):1609-16.
2005. MCMC-based particle filtering for tracking a variable number of interacting targets.. IEEE Trans Pattern Anal Mach Intell. 27(11):1805-19.
2005. MCMC-Based Particle Filtering for Tracking a Variable Number of Interacting Targets. IEEE Transactions on Pattern Analysis and Machine Intelligence. 27(11):1805-1918.
2012. Quantitative measurement of allele-specific protein expression in a diploid yeast hybrid by LC-MS.. Mol Syst Biol. 8:602.
2013. Primate transcript and protein expression levels evolve under compensatory selection pressures.. Science. 342(6162):1100-4.
2009. Protein quantification across hundreds of experimental conditions. Proceedings of the National Academy of Sciences. 106(37):15544-15548.