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Patro R., Ip CYiu, Bista S., Varshney A.  2011.  Social Snapshot: A System for Temporally Coupled Social Photography. Computer Graphics and Applications, IEEEComputer Graphics and Applications, IEEE. 31
Patro R., Dickerson J.P, Bista S., Gupta S.K, Varshney A.  2012.  Speeding Up Particle Trajectory Simulations under Moving Force Fields using GPUs. Journal of Computing and Information Science in EngineeringJournal of Computing and Information Science in Engineering.
Patro R., Ip C.Y, Varshney A, Hagen H..  2010.  Saliency Guided Summarization of Molecular Dynamics Simulations. Scientific Visualization: Advanced ConceptsScientific Visualization: Advanced Concepts. 1
Paulson JN, O. Stine C, Bravo HCorrada, Pop M..  2013.  Differential abundance analysis for microbial marker-gene surveys. Nature methods. 10
Paulson JN, Bravo éctorCorrada, Pop M.  2014.  Reply to: "A fair comparison". Nature Methods. 11(4):359-360.
Peculis BA, Mount SM.  1996.  Ribosomal RNA: small nucleolar RNAs make their mark.. Curr Biol. 6(11):1413-5.
Peisach E, Selengut J., Dunaway-Mariano D, Allen KN.  2004.  X-ray crystal structure of the hypothetical phosphotyrosine phosphatase MDP-1 of the haloacid dehalogenase superfamily. BiochemistryBiochemistry. 43
Peng X, Mount SM.  1995.  Genetic enhancement of RNA-processing defects by a dominant mutation in B52, the Drosophila gene for an SR protein splicing factor.. Mol Cell Biol. 15(11):6273-82.
Peng XB, Mount SM.  1990.  Characterization of enhancer-of-white-apricot in Drosophila melanogaster.. Genetics. 126(4):1061-9.
Pepling M, Mount SM.  1990.  Sequence of a cDNA from the Drosophila melanogaster white gene.. Nucleic Acids Res. 18(6):1633.
Persi E, Wolf YI, Koonin EV.  2016.  Positive and strongly relaxed purifying selection drive the evolution of repeats in proteins. Nature Communications. 7:13570.
Pertea M, Mount SM, Salzberg SL.  2007.  A computational survey of candidate exonic splicing enhancer motifs in the model plant Arabidopsis thaliana.. BMC Bioinformatics. 8:159.
Phillippy AM, Schatz MC, Pop M..  2008.  Genome assembly forensics: finding the elusive mis-assembly. Genome BiologyGenome Biology. 9
Phillippy A, Treangen T.  2012.  Irreconcilable differences: divorcing geographic mutation and recombination rates within a global MRSA clone. Genome Biology. 13
Plasschaert R.N, Vigneau S., Tempera I., Gupta R., Maksimoska J., Everett L., Davuluri R., Mamorstein R., Lieberman P.M, Schultz D. et al..  2014.  CTCF binding site sequence differences are associated with unique regulatory and functional trends during embryonic stem cell differentiation. Nucleic Acids ResNucleic Acids ResNucleic Acids Res. 42:774-89.
Pollock DD, Eisen JA, Doggett NA, Cummings MP.  2000.  A Case for Evolutionary Genomics and the Comprehensive Examination of Sequence Biodiversity. Molecular Biology and EvolutionMol Biol EvolMolecular Biology and EvolutionMol Biol Evol. 17
Pop M..  2009.  Genome Assembly Reborn: Recent Computational Challenges. Briefings in BioinformaticsBrief BioinformBriefings in BioinformaticsBrief Bioinform. 10
Pop M., Phillippy A, Delcher AL, Salzberg SL.  2004.  Comparative Genome Assembly. Briefings in BioinformaticsBrief BioinformBriefings in BioinformaticsBrief Bioinform. 5
Pop M., Salzberg SL.  2008.  Bioinformatics challenges of new sequencing technology. Trends in GeneticsTrends in Genetics. 24
Pop M., Kosack DS, Salzberg SL.  2004.  Hierarchical Scaffolding With Bambus. Genome ResearchGenome Research. 14
Pop M., Salzberg S.L, Shumway M..  2002.  Genome sequence assembly: Algorithms and issues. ComputerComputer. 35
Pop M..  2012.  We are what we eat: how the diet of infants affects their gut microbiome. Genome BiologyGenome Biology. 13
Pop M, Touzet H.  2015.  Algorithms in Bioinformatics: 15th International Workshop, WABI 2015. Lecture Notes in Bioinformatics. :328.
Pop M, Salzberg SL.  2015.  Use and mis-use of supplementary material in science publications. BMC Bioinformatics. 1632733845166(1)
Pop M., Adviser-Kosaraju S.R.  2000.  Exploiting coherence in spatial database queries.

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