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Journal Articles

Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bork P, Buillard V, Cerutti L, Copley R et al.. 2007. New developments in the InterPro database.. Nucleic Acids Res. 35(Database issue):D224-8.

Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bork P, Buillard V, Cerutti L, Copley R et al.. 2007. New developments in the InterPro database.. Nucleic Acids Res. 35(Database issue):D224-8.

Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP et al.. 2014. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Biology direct. 9:20.

Khan Z, Herman RA, Wallen K, Balch T. 2005. An Outdoor 3-d Visual Tracking System for the Study of Spatial Navigation and Memory in Rhesus Monkeys. Behavior Research Methods,Instruments & Computers. 37(3):453-463.

Kurkulos M, Weinberg JM, Roy D, Mount SM. 1994. P element-mediated in vivo deletion analysis of white-apricot: deletions between direct repeats are strongly favored.. Genetics. 136(3):1001-11.

Shi W, Wahba G, Irizarry RA, Bravo HCorrada, Wright SJ. 2012. The partitioned LASSO-patternsearch algorithm with application to gene expression data. BMC bioinformaticsBMC Bioinformatics. 13

Shi W, Wahba G, Irizarry RA, Bravo HCorrada, Wright SJ. 2012. The partitioned LASSO-patternsearch algorithm with application to gene expression data. BMC bioinformaticsBMC Bioinformatics. 13

Nguyen N-phuong, Warnow T, Pop M, White B. 2016. A perspective on 16S rRNA operational taxonomic unit clustering using sequence similarity. npj Biofilms and Microbiomes. 2:16004.

Nguyen N-phuong, Warnow T, Pop M, White B. 2016. A perspective on 16S rRNA operational taxonomic unit clustering using sequence similarity. npj Biofilms and Microbiomes. 2:16004.

Yizhak K, Gaude E, Le Dévédec S, Waldman YY, Stein GY, van de Water B, Frezza C, Ruppin E. 2014. Phenotype-based cell-specific metabolic modeling reveals metabolic liabilities of cancer.. Elife. 3

Cummings MP, Welschmeyer N.A. 1998. Pigment composition of putatively achlorophyllous angiosperms. Plant Syst EvolPlant Syst Evol. 210

Kurkulos M, Weinberg JM, Pepling ME, Mount SM. 1991. Polyadenylylation in copia requires unusually distant upstream sequences.. Proc Natl Acad Sci U S A. 88(8):3038-42.

Vardhanabhuti S, Wang J, Hannenhalli S. 2007. Position and distance specificity are important determinants of cis-regulatory motifs in addition to evolutionary conservation. Nucleic Acids ResearchNucleic Acids Research. 35

Persi E, Wolf YI, Koonin EV. 2016. Positive and strongly relaxed purifying selection drive the evolution of repeats in proteins. Nature Communications. 7:13570.

Jerby-Arnon L, Pfetzer N, Waldman YY, McGarry L, James D, Shanks E, Seashore-Ludlow B, Weinstock A, Geiger T, Clemons PA et al.. 2014. Predicting cancer-specific vulnerability via data-driven detection of synthetic lethality.. Cell. 158(5):1199-209.

Jerby-Arnon L, Pfetzer N, Waldman YY, McGarry L, James D, Shanks E, Seashore-Ludlow B, Weinstock A, Geiger T, Clemons PA et al.. 2014. Predicting cancer-specific vulnerability via data-driven detection of synthetic lethality.. Cell. 158(5):1199-209.

Wagner J, Paulson JN, Wang X, Bhattacharjee B, Bravo éctorCorrada. 2016. Privacy-Preserving Microbiome Analysis Using Secure Computation. Bioinformatics. :btw073.

Wagner J, Paulson JN, Wang X, Bhattacharjee B, Bravo éctorCorrada. 2016. Privacy-Preserving Microbiome Analysis Using Secure Computation. Bioinformatics. :btw073.

Myers G., Hannenhalli S, Sankoff D., Istrail S., Pevzner P., Waterman M.. 2002. Proceedings of the sixth annual international conference on Computational biology.

Bernstein LB, Mount SM, Weiner AM. 1983. Pseudogenes for human small nuclear RNA U3 appear to arise by integration of self-primed reverse transcripts of the RNA into new chromosomal sites.. Cell. 32(2):461-72.

Khan Z, Wang Y-C, Wieschaus EF, Kaschube M. 2014. Quantitative 4D analyses of epithelial folding during Drosophila gastrulation.. Development. 141(14):2895-900.

Khan Z, Wang Y-C, Wieschaus EF, Kaschube M. 2014. Quantitative 4D analyses of epithelial folding during Drosophila gastrulation.. Development. 141(14):2895-900.

Mount SM, Wolin SL. 2015. Recognizing the 35th anniversary of the proposal that snRNPs are involved in splicing.. Mol Biol Cell. 26(20):3557-60.

Qasim AN, Metkus TS, Tadesse M, Lehrke M, Restine S, Wolfe ML, Hannenhalli S, Cappola T, Rader DJ, Reilly MP. 2009. Resistin gene variation is associated with systemic inflammation but not plasma adipokine levels, metabolic syndrome or coronary atherosclerosis in nondiabetic Caucasians. Clinical EndocrinologyClinical Endocrinology. 70

Akula N., Barb J., Jiang X., Wendland J.R, Choi K.H, Sen S.K, Hou L., Chen D.TW, Laje G., Johnson K. et al.. 2014. RNA-sequencing of the brain transcriptome implicates dysregulation of neuroplasticity, circadian rhythms and GTPase binding in bipolar disorder. Molecular psychiatry.

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