Publications

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G
Gardner MJ, Shallom SJ, Carlton JM, Salzberg SL, Nene V, Shoaibi A, Ciecko A, Lynn J, Rizzo M, Weaver B et al..  2002.  Sequence of Plasmodium falciparum chromosomes 2, 10, 11 and 14. NatureNature. 419
Ghedin E, Bringaud F, Peterson J, Myler P, Berriman M, Ivens A, Andersson B, Bontempi E, Eisen J, Angiuoli S et al..  2004.  Gene synteny and evolution of genome architecture in trypanosomatids.. Mol Biochem Parasitol. 134(2):183-91.
Guo M, Mount SM.  1995.  Localization of sequences required for size-specific splicing of a small Drosophila intron in vitro.. J Mol Biol. 253(3):426-37.
Guo M, Lo PC, Mount SM.  1993.  Species-specific signals for the splicing of a short Drosophila intron in vitro.. Mol Cell Biol. 13(2):1104-18.
H
Haft DH, Selengut J., White O.  2003.  The TIGRFAMs database of protein families. Nucleic acids researchNucleic Acids Research. 31
Hotopp JCDunning, Lin M, Madupu R, Crabtree J, Angiuoli SV, Eisen JA, Eisen J, Seshadri R, Ren Q, Wu M et al..  2006.  Comparative genomics of emerging human ehrlichiosis agents. PLoS geneticsPLoS genetics. 2
J
Joseph SJ, Fernández-Robledo JA, Gardner MJ, El-Sayed NM, Kuo C-H, Schott EJ, Wang H, Kissinger JC, Vasta GR.  2010.  The Alveolate Perkinsus marinus: biological insights from EST gene discovery.. BMC Genomics. 11:228.
K
Kanodia JS, Kim Y, Tomer R, Khan Z, Chung K, Storey JD, Lu H, Keller PJ, Shvartsman SY.  2011.  A computational statistics approach for estimating the spatial range of morphogen gradients.. Development. 138(22):4867-74.
Khan Z, Wang Y-C, Wieschaus EF, Kaschube M.  2014.  Quantitative 4D analyses of epithelial folding during Drosophila gastrulation.. Development. 141(14):2895-900.
Khan Z, Herman RA, Wallen K, Balch T.  2005.  An outdoor 3-D visual tracking system for the study of spatial navigation and memory in rhesus monkeys.. Behav Res Methods. 37(3):453-63.
Khan Z, Bloom JS, Garcia BA, Singh M, Kruglyak L.  2009.  Protein quantification across hundreds of experimental conditions.. Proc Natl Acad Sci U S A. 106(37):15544-8.
Khan Z, Balch T, Dellaert F.  2005.  MCMC-based particle filtering for tracking a variable number of interacting targets.. IEEE Trans Pattern Anal Mach Intell. 27(11):1805-19.
Khan Z, Ford MJ, Cusanovich DA, Mitrano A, Pritchard JK, Gilad Y.  2013.  Primate transcript and protein expression levels evolve under compensatory selection pressures.. Science. 342(6162):1100-4.
Kim G., Selengut J., Levine R.L.  2000.  Carbonic anhydrase III: the phosphatase activity is extrinsic. Archives of biochemistry and biophysicsArchives of biochemistry and biophysics. 377
Kim D, Chiurillo MAngel, El-Sayed N, Jones K, Santos MRM, Porcile PE, Andersson B, Myler P, da Silveira JFranco, Ramírez JLuis.  2005.  Telomere and subtelomere of Trypanosoma cruzi chromosomes are enriched in (pseudo)genes of retrotransposon hot spot and trans-sialidase-like gene families: the origins of T. cruzi telomeres.. Gene. 346:153-61.
Korpal M, Ell BJ, Buffa FM, Ibrahim T, Blanco MA, Celià-Terrassa T, Mercatali L, Khan Z, Goodarzi H, Hua Y et al..  2011.  Direct targeting of Sec23a by miR-200s influences cancer cell secretome and promotes metastatic colonization.. Nat Med. 17(9):1101-8.
Kurkulos M, Weinberg JM, Roy D, Mount SM.  1994.  P element-mediated in vivo deletion analysis of white-apricot: deletions between direct repeats are strongly favored.. Genetics. 136(3):1001-11.
Kurkulos M, Weinberg JM, Pepling ME, Mount SM.  1991.  Polyadenylylation in copia requires unusually distant upstream sequences.. Proc Natl Acad Sci U S A. 88(8):3038-42.
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Lerner MR, Boyle JA, Mount SM, Wolin SL, Steitz JA.  1980.  Are snRNPs involved in splicing? Nature. 283(5743):220-4.
Lin C-F, Mount SM, Jarmołowski A, Makałowski W.  2010.  Evolutionary dynamics of U12-type spliceosomal introns.. BMC Evol Biol. 10:47.
Lo PC, Mount SM.  1990.  Drosophila melanogaster genes for U1 snRNA variants and their expression during development.. Nucleic Acids Res. 18(23):6971-9.
Lo PC, Roy D, Mount SM.  1994.  Suppressor U1 snRNAs in Drosophila.. Genetics. 138(2):365-78.

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