Publications
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2006. Conservation Patterns in cis-Elements Reveal Compensatory Mutations. Comparative GenomicsComparative Genomics. 4205
2007. Characterization of Ehp, a Secreted Complement Inhibitory Protein from Staphylococcus aureus. Journal of Biological ChemistryJournal of Biological Chemistry. 282
2010. Comparative Genomics of Clinical and Environmental Vibrio Mimicus. Proceedings of the National Academy of SciencesPNASProceedings of the National Academy of SciencesPNAS. 107
2013. Contribution of nucleosome binding preferences and co-occurring DNA sequences to transcription factor binding. BMC Genomics. 14(1):428.
2005. Critical Factors Influencing the Occurrence of Vibrio Cholerae in the Environment of Bangladesh. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 71
2004. CHARACTERIZATION OF< i> Ath17, A QUANTITATIVE TRAIT LOCUS FOR ATHEROSCLEROSIS SUSCEPTIBILITY BETWEEN C57BL/6J AND 129S1/SvImJ; SINGLE-NUCLEOTIDE POLYMORPHISMS HAVE IMPORTANT IMPLICATIONS ON IDENTIFYING ATHEROSCLEROSIS MODIFIER GENES. Cardiovascular PathologyCardiovascular Pathology. 13
2002. Characterization of Pseudoalteromonas citrea and P. nigrifaciens Isolated from Different Ecological Habitats Based on REP-PCR Genomic Fingerprints. Systematic and Applied MicrobiologySystematic and Applied Microbiology. 25
2011. A computational statistics approach for estimating the spatial range of morphogen gradients.. Development. 138(22):4867-74.
2011. A computational statistics approach for estimating the spatial range of morphogen gradients. Development. 138(22):4867-4874.
2000. Carbonic anhydrase III: the phosphatase activity is extrinsic. Archives of biochemistry and biophysicsArchives of biochemistry and biophysics. 377
2006. A compact mathematical programming formulation for DNA motif finding. Combinatorial Pattern Matching.
2011. A cost-aggregating integer linear program for motif finding. Journal of Discrete AlgorithmsJournal of Discrete Algorithms. 9
2009. A cooperative combinatorial Particle Swarm Optimization algorithm for side-chain packing. IEEE Swarm Intelligence Symposium, 2009. SIS '09.
2008. The Complete Genome Sequence of Thermococcus Onnurineus NA1 Reveals a Mixed Heterotrophic and Carboxydotrophic Metabolism. Journal of BacteriologyJ. Bacteriol.Journal of BacteriologyJ. Bacteriol.. 190
1985. Complete nucleotide sequence of the Drosophila transposable element copia: homology between copia and retroviral proteins.. Mol Cell Biol. 5(7):1630-8.
2003. Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440. Environmental MicrobiologyEnvironmental Microbiology. 5
2014. Conservation in first introns is positively associated with the number of exons within genes and the presence of regulatory epigenetic signals. BMC Genomics. 15(1):526.
1990. Characterization of enhancer-of-white-apricot in Drosophila melanogaster.. Genetics. 126(4):1061-9.