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Journal Articles
Dogan RIslamaj, Getoor L, W Wilbur J, Mount SM.  2007.  SplicePort--an interactive splice-site analysis tool.. Nucleic Acids Res. 35(Web Server issue):W285-91.
Patro R., Dickerson J.P, Bista S., Gupta S.K, Varshney A.  2012.  Speeding Up Particle Trajectory Simulations under Moving Force Fields using GPUs. Journal of Computing and Information Science in EngineeringJournal of Computing and Information Science in Engineering.
Nickerson ML, Im KM, Misner KJ, Tan W, Lou H, Gold B, Wells DW, Bravo HCorrada, Fredrikson KM, Harkins TT et al..  2013.  Somatic alterations contributing to metastasis of a castration-resistant prostate cancer. Human mutationHuman mutation. 34
Dillon LAL, Suresh R, Okrah K, Bravo HCorrada, Mosser DM, El-Sayed NM.  2015.  Simultaneous transcriptional profiling of Leishmania major and its murine macrophage host cell reveals insights into host-pathogen interactions.. BMC Genomics. 16(1):1108.
Fermin D.R, Barac A., Lee S., Polster S.P, Hannenhalli S, Bergemann T.L, Grindle S., Dyke D.B, Pagani F., Miller L.W et al..  2008.  Sex and age dimorphism of myocardial gene expression in nonischemic human heart failure. Circulation: Cardiovascular GeneticsCirculation: Cardiovascular Genetics. 1
Salzberg SL, Hotopp JCD, Delcher AL, Pop M., Smith DR, Eisen MB, Nelson WC.  2005.  Serendipitous discovery of Wolbachia genomes in multiple Drosophila species. Genome BiologyGenome Biology. 6
Cerqueira GC, Bartholomeu DC, DaRocha WD, Hou L, Freitas-Silva DM, Machado CRenato, El‐Sayed NM, Teixeira SMR.  2008.  Sequence diversity and evolution of multigene families in Trypanosoma cruzi. Molecular and Biochemical ParasitologyMolecular and Biochemical Parasitology. 157
el-Sayed NMA, Ghedin E, Song J, MacLeod A, Bringaud F, Larkin C, Wanless D, Peterson J, Hou L, Taylor S et al..  2003.  The sequence and analysis of Trypanosoma brucei chromosome II.. Nucleic Acids Res. 31(16):4856-63.
De Magny GConstantin, Mozumder PK, Grim CJ, Hasan NA, M. Naser N, Alam M, R. Sack B, Huq A, Colwell RR.  2011.  Role of Zooplankton Diversity in Vibrio Cholerae Population Dynamics and in the Incidence of Cholera in the Bangladesh Sundarbans. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 77
Akula N., Barb J., Jiang X., Wendland J.R, Choi K.H, Sen S.K, Hou L., Chen D.TW, Laje G., Johnson K. et al..  2014.  RNA-sequencing of the brain transcriptome implicates dysregulation of neuroplasticity, circadian rhythms and GTPase binding in bipolar disorder. Molecular psychiatry.
Coutard F,, Crassous P, Droguet M,, Gobin E, Colwell RR, Pommepuy M, Hervio-Heath D.  2007.  Recovery in culture of viable but nonculturable Vibrio parahaemolyticus: regrowth or resuscitation? The ISME JournalThe ISME journal. 1
Haley BJ, Grim CJ, Hasan NA, Taviani E, Jongsik C, Brettin TS, Bruce DC, Challacombe JF, J. Detter C, Han CS et al..  2010.  The pre‐seventh pandemic Vibrio cholerae BX 330286 El Tor genome: evidence for the environment as a genome reservoir. Environmental Microbiology ReportsEnvironmental Microbiology Reports. 2
G. de Magny C, Long W., Brown C.W, Hood R.R, Huq A., Murtugudde R., Colwell RR.  2009.  Predicting the distribution of Vibrio spp. in the Chesapeake Bay: a Vibrio cholerae case study. EcoHealthEcoHealth. 6
Simola D.F, Dalva M., Hannenhalli S, Liebhaber S., Bucan M., Ungar L..  2005.  Post-transcriptional Control in Mammalian Dendrites.
De Magny GConstantin, Mozumder PK, Grim CJ, Hasan NA, M. Naser N, Alam M, Sack B, Huq A, Colwell RR.  2011.  Population Dynamics of Vibrio Cholerae and Cholera in the Bangladesh Sundarbans: Role of Zooplankton Diversity. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol..
Brown TS, Jacob CG, Silva JC, Takala-Harrison S, Djimdé A, Dondorp AM, Fukuda M, Noedl H, Nyunt MMyaing, Kyaw MPhone et al..  2015.  Plasmodium falciparum field isolates from areas of repeated emergence of drug resistant malaria show no evidence of hypermutator phenotype. Infection, Genetics and Evolution. 30:318-322.
Brown TS, Jacob CG, Silva JC, Takala-Harrison S, Djimdé A, Dondorp AM, Fukuda M, Noedl H, Nyunt MMyaing, Kyaw MPhone et al..  2015.  Plasmodium falciparum field isolates from areas of repeated emergence of drug resistant malaria show no evidence of hypermutator phenotype. Infection, Genetics and Evolution. 30:318-322.
García-Varela M., G. de León P-P, de la Torre P., Cummings MP, Sarma S.S, Laclette J.P.  2000.  Phylogenetic relationships of Acanthocephala based on analysis of 18S ribosomal RNA gene sequences. J Mol EvolJ Mol Evol. 50
García-Varela M., G. de León P-P, de la Torre P., Cummings MP, Sarma S.S, Laclette J.P.  2000.  Phylogenetic relationships of Acanthocephala based on analysis of 18S ribosomal RNA gene sequences. J Mol EvolJ Mol Evol. 50
García-Varela M., Cummings MP, G. de León P-P, Gardner S.L, Laclette J.P.  2002.  Phylogenetic analysis based on 18S ribosomal RNA gene sequences supports the existence of class Polyacanthocephala (Acanthocephala). Mol Phylogenet EvolMol Phylogenet Evol. 23
Pruzzo C., Huq A., Colwell RR, Donelli G..  2005.  Pathogenic Vibrio species in the marine and estuarine environment. Oceans and health: pathogens in the marine environmentOceans and health: pathogens in the marine environment.
Treangen T, Darling AE, Achaz G, Ragan MA, Messeguer X, Rocha EPC.  2009.  A novel heuristic for local multiple alignment of interspersed DNA repeats. IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB). 6:180–189.
Treangen T, Darling A.E., Achaz G., Ragan M.A., Messeguer X., Rocha E.P.C..  2009.  A Novel Heuristic for Local Multiple Alignment of Interspersed DNA Repeats. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 6(2):180-189.
Souza RT, Santos MRM, Lima FM, El‐Sayed NM, Myler PJ, Ruiz JC, da Silveira JFranco.  2007.  New Trypanosoma cruzi Repeated Element That Shows Site Specificity for Insertion. Eukaryotic CellEukaryotic Cell. 6
Bringaud F., Biteau N., Melville S.E, Hez S., El‐Sayed NM, Leech V., Berriman M., Hall N., Donelson J.E, Baltz T..  2002.  A new, expressed multigene family containing a hot spot for insertion of retroelements is associated with polymorphic subtelomeric regions of Trypanosoma brucei. Eukaryotic cellEukaryotic Cell. 1

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