Publications

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Colwell RR.  2008.  The marine environment and human health: the cholera model. Global Climate Change and Extreme Weather Events: Understanding the Contributions to Infectious Disease EmergenceGlobal Climate Change and Extreme Weather Events: Understanding the Contributions to Infectious Disease Emergence.
Colwell RR.  2006.  Microbial diversity in the era of genomics. SYMPOSIA-SOCIETY FOR GENERAL MICROBIOLOGY. 66
Colwell RR.  2003.  ANNUAL REVIEW & FORECAST REPORTS-THE OCEANS: TO PROTECT AND TO PLOW. Sea TechnologySea Technology. 44
Colwell RR.  2002.  Fulfilling the promise of marine biotechnology. Marine biotechnology in the twenty-first century: problems, promise, and productsMarine biotechnology in the twenty-first century: problems, promise, and products.
Colwell RR, Chun J..  2009.  The Genus Vibrio and Related Genera. Practical handbook of microbiologyPractical handbook of microbiology.
Colwell RR.  2003.  From terabytes to insights. Communications of the ACMCommunications of the ACM. 46
Colwell RR.  2009.  Viable but not cultivable bacteria. Uncultivated MicroorganismsUncultivated Microorganisms.
Colwell RR.  2008.  Silent Sputnik. BioScienceBioScience. 58
Colwell RR.  2004.  Infectious disease and environment: cholera as a paradigm for waterborne disease. International MicrobiologyInternational Microbiology. 7
Colwell RR, Faruque S.M, Nair G.B.  2004.  Free-Living to Freewheeling: The Evolution of Vibrio cholerae from Innocence to Infamy. Infectious Disease and Host-Pathogen EvolutionInfectious Disease and Host-Pathogen Evolution.
Colwell RR.  2002.  A voyage of discovery: cholera, climate and complexity. Environmental MicrobiologyEnvironmental Microbiology. 4
Colwell RR.  2004.  A Tangled Bank: Reflections on the Tree of Life and Human Health. Assembling the Tree of LifeAssembling the Tree of Life.
Conaty JP.  1973.  Surgery of the hip and knee in patients with rheumatoid arthritis.. J Bone Joint Surg Am. 55(2):301-14.
Consortium HMicrobiome, Treangen T.  2012.  Structure, function and diversity of the healthy human microbiome. Nature. 486:207–214.
Consortium HMicrobiome, Treangen T.  2012.  A framework for human microbiome research. Nature. 486:215–221.
Coutard F,, Crassous P, Droguet M,, Gobin E, Colwell RR, Pommepuy M, Hervio-Heath D.  2007.  Recovery in culture of viable but nonculturable Vibrio parahaemolyticus: regrowth or resuscitation? The ISME JournalThe ISME journal. 1
Cummings MP, Neel MC, Shaw KL.  2008.  A GENEALOGICAL APPROACH TO QUANTIFYING LINEAGE DIVERGENCE. EvolutionEvolution. 62
Cummings MP.  1991.  Review of Fundamentals of Molecular Evolution, by Li. W.-H. and D. Graur. CladisticsCladistics. 7
Cummings MP, Handley S.A, Myers D.S, Reed D.L, Rokas A., Winka K..  2003.  Comparing bootstrap and posterior probability values in the four-taxon case. Syst BiolSyst Biol. 52
Cummings MP, Otto S.P, Wakeley J..  1995.  Sampling properties of DNA sequence data in phylogenetic analysis. Mol Biol EvolMol Biol Evol. 12
Cummings MP, Myers D.S, Mangelson M..  2004.  Applying permutation tests to tree-based statistical models: extending the R package rpart. 2004-24
Cummings MP.  2004.  BAMBE, DnaSP, ENCprime/SeqCount, LAMARC, MacClade, MEGA, Modeltest, MrBayes, PAML, PAUP*, PHYLIP, r8s, readseq, Seq-Gen, Sites, TreeView. Dictionary of Bioinformatics. :39-40,123-124,146,288-289,305,318,337,352,388,392,398-399,455,457,502,522,568.
Cummings MP, Temple G.G.  2010.  Broader incorporation of bioinformatics in education: opportunities and challenges. Brief BioinformBrief Bioinform. 11
Cummings MP.  1992.  Copia-like retrotransposons in plants: a brief introduction. The Plant Genetics NewsletterThe Plant Genetics Newsletter. 8
Cummings MP.  2004.  PHYLIP (Phylogeny Inference Package).

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