Publications

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Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HCorrada, Davis S, Gatto L, Girke T et al..  2015.  Orchestrating high-throughput genomic analysis with Bioconductor.. Nat Methods. 12(2):115-21.
Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HCorrada, Davis S, Gatto L, Girke T et al..  2015.  Orchestrating high-throughput genomic analysis with Bioconductor.. Nat Methods. 12(2):115-21.
Belkin S, Colwell RR.  2006.  Oceans And Health: Pathogens In The Marine Environment.
Grim CJ, Choi J, Jongsik C, Jeon Y-S, Taviani E, Hasan NA, Haley B, Huq A, Colwell RR.  2010.  Occurrence of the Vibrio cholerae seventh pandemic VSP-I island and a new variant. OMICS: A Journal of Integrative BiologyOMICS: A Journal of Integrative Biology. 14
Grim CJ, Choi J, Jongsik C, Jeon Y-S, Taviani E, Hasan NA, Haley B, Huq A, Colwell RR.  2010.  Occurrence of the Vibrio cholerae seventh pandemic VSP-I island and a new variant. OMICS: A Journal of Integrative BiologyOMICS: A Journal of Integrative Biology. 14
Mozumder P.K, Banu M.A, Naser M.N, Ali M.S, Alam M., Sack R.B, Colwell RR, Huq A..  2012.  Occurrence of protozoans & their limnological relationships in some ponds of Mathbaria, Bangladesh. University Journal of Zoology, Rajshahi UniversityUniversity Journal of Zoology, Rajshahi University. 29
Grim CJ, Taviani E, Alam M, Huq A, R. Sack B, Colwell RR.  2008.  Occurrence and Expression of Luminescence in Vibrio Cholerae. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 74
Gil AI, Louis VR, Rivera ING, Lipp E, Huq A, Lanata CF, Taylor DN, Russek‐Cohen E, Choopun N, R. Sack B et al..  2004.  Occurrence and distribution of Vibrio cholerae in the coastal environment of Peru. Environmental MicrobiologyEnvironmental Microbiology. 6
Gil AI, Louis VR, Rivera ING, Lipp E, Huq A, Lanata CF, Taylor DN, Russek‐Cohen E, Choopun N, R. Sack B et al..  2004.  Occurrence and distribution of Vibrio cholerae in the coastal environment of Peru. Environmental MicrobiologyEnvironmental Microbiology. 6
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Cummings MP, Clegg M.T.  1998.  Nucleotide sequence diversity at the alcohol dehydrogenase 1 locus in wild barley (ıt Hordeum vulgare ssp. ıt spontaneum): an evaluation of the background selection hypothesis. Proc Natl Acad Sci USAProc Natl Acad Sci USA. 95
Cummings MP, Clegg M.T.  1998.  Nucleotide sequence diversity at the alcohol dehydrogenase 1 locus in wild barley (ıt Hordeum vulgare ssp. ıt spontaneum): an evaluation of the background selection hypothesis. Proc Natl Acad Sci USAProc Natl Acad Sci USA. 95
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP et al..  2014.  A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Biology direct. 9:20.
Khondker M, Bhuiyan RAhmed, Yeasmin J, Alam M, R. Sack B, Huq A, Colwell RR.  2009.  New records of phytoplankton for Bangladesh. 9. Some rare and a new species. Bangladesh Journal of Plant TaxonomyBangladesh Journal of Plant Taxonomy. 16
Khondker M, Bhuiyan RAhmed, Yeasmin J, Alam M, R. Sack B, Huq A, Colwell RR.  2008.  New records of phytoplankton for Bangladesh. 8. Trachelomonas Ehr. (Euglenophyceae). Bangladesh Journal of BotanyBangladesh Journal of Botany. 37
Khondker M, Bhuiyan RAhmed, Yeasmin J, Alam M, R. Sack B, Huq A, Colwell RR.  2008.  New records of phytoplankton for Bangladesh. 7. Phacus spp. Bangladesh Journal of BotanyBangladesh Journal of Botany. 37
Khondker M, Bhuiyan RAhmed, Yeasmin J, Alam M, R. Sack B, Huq A, Colwell RR.  2008.  New records of phytoplankton for Bangladesh. 5. Euglena, Euglenocapsa. Bangladesh Journal of Plant TaxonomyBangladesh Journal of Plant Taxonomy. 15
Khondker M, Bhuiyan RAhmed, Yeasim J, Alam M, R. Sack B, Huq A, Colwell RR.  2007.  New records of phytoplankton for Bangladesh. 4. Chlorococcales. Bangladesh Journal of Plant TaxonomyBangladesh Journal of Plant Taxonomy. 14
Khondker M, Bhuiyan RAhmed, Yeasmin J, Alam M, R. Sack B, Huq A, Colwell RR.  2007.  New records of phytoplankton for Bangladesh. 3. Volvocales. Bangladesh Journal of Plant TaxonomyBangladesh Journal of Plant Taxonomy. 14
Khondker M, Bhuiyan RAhmed, Yeasmin J, Alam M, R. Sack B, Huq A, Colwell RR.  2008.  New records of phytoplankton for Bangladesh. 2. Cryptophyceae and Synurophyceae. Bangladesh Journal of BotanyBangladesh Journal of Botany. 36
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bork P, Buillard V, Cerutti L, Copley R et al..  2007.  New developments in the InterPro database.. Nucleic Acids Res. 35(Database issue):D224-8.
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bork P, Buillard V, Cerutti L, Copley R et al..  2007.  New developments in the InterPro database.. Nucleic Acids Res. 35(Database issue):D224-8.
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bork P, Buillard V, Cerutti L, Copley R et al..  2007.  New developments in the InterPro database.. Nucleic Acids Res. 35(Database issue):D224-8.
Myers D.S, Cummings MP.  2003.  Necessity is the mother of invention: a simple grid computing system using commodity tools. J Parallel Distr ComJ Parallel Distr Com. 63
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Sohn J.C, Regier J.C, Mitter C., Davis D., Landry J.F, Zwick A., Cummings MP.  2013.  A molecular phylogeny for Yponomeutoidea (Insecta, Lepidoptera, Ditrysia) and its implications for classification, biogeography and\ the evolution of host plant use. PLoS One.
Regier JC, Mitter C, M. SOLIS ALMA, HAYDEN JAMESE, LANDRY BERNARD, NUSS MATTHIAS, Simonsen TJ, Yen S-H, Zwick A, Cummings MP.  2012.  A molecular phylogeny for the pyraloid moths (Lepidoptera: Pyraloidea) and its implications for higher-level classification. Systematic Entomology. 37(4):635-656.

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