Publications

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2005
Bushman F, Lewinski M, Ciuffi A, Barr S, Leipzig J, Hannenhalli S, Hoffmann C.  2005.  Genome-wide analysis of retroviral DNA integration. Nat Rev MicroNat Rev MicroNat Rev MicroNat Rev Micro. 3
Colwell RR.  2005.  Global microbial ecology of Vibrio cholerae. Oceans and health: pathogens in the marine environmentOceans and health: pathogens in the marine environment.
Cummings MP, Huskamp J.C.  2005.  Grid computing. EDUCAUSE ReviewEDUCAUSE Review. 40
Cummings MP, Meyer A..  2005.  Magic bullets and golden rules: data sampling in molecular phylogenetics. Zoology (Jena)Zoology (Jena). 108
Pruzzo C., Huq A., Colwell RR, Donelli G..  2005.  Pathogenic Vibrio species in the marine and estuarine environment. Oceans and health: pathogens in the marine environmentOceans and health: pathogens in the marine environment.
Kim D, Chiurillo MAngel, El-Sayed N, Jones K, Santos MRM, Porcile PE, Andersson B, Myler P, da Silveira JFranco, Ramírez JLuis.  2005.  Telomere and subtelomere of Trypanosoma cruzi chromosomes are enriched in (pseudo)genes of retrotransposon hot spot and trans-sialidase-like gene families: the origins of T. cruzi telomeres.. Gene. 346:153-61.
Louis VR, Gillespie IA, O'Brien SJ, Russek-Cohen E, Pearson AD, Colwell RR.  2005.  Temperature-Driven Campylobacter Seasonality in England and Wales. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 71
Boonyaratanakornkit BB, Simpson AJ, Whitehead TA, Fraser CM, el-Sayed NMA, Clark DS.  2005.  Transcriptional profiling of the hyperthermophilic methanarchaeon Methanococcus jannaschii in response to lethal heat and non-lethal cold shock.. Environ Microbiol. 7(6):789-97.
Boonyaratanakornkit BB, Simpson AJ, Whitehead TA, Fraser CM, El‐Sayed NM, Clark DS.  2005.  Transcriptional profiling of the hyperthermophilic methanarchaeon Methanococcus jannaschii in response to lethal heat and non‐lethal cold shock. Environmental MicrobiologyEnvironmental Microbiology. 7
Barry JD, Marcello L, Morrison LJ, Read AF, Lythgoe K, Jones N, Carrington M, Blandin G, Böhme U, Caler E et al..  2005.  What the genome sequence is revealing about trypanosome antigenic variation.. Biochem Soc Trans. 33(Pt 5):986-9.
Barry JD, Marcello L, Morrison LJ, Read AF, Lythgoe K, Jones N, Carrington M, Blandin G, Böhme U, Caler E et al..  2005.  What the genome sequence is revealing about trypanosome antigenic variation.. Biochem Soc Trans. 33(Pt 5):986-9.
Joardar V, Lindeberg M, Jackson RW, Selengut J., Dodson R, Brinkac LM, Daugherty SC, Deboy R, A. Durkin S, Giglio MGwinn et al..  2005.  Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition. Journal of bacteriologyJournal of bacteriology. 187
Joardar V, Lindeberg M, Jackson RW, Selengut J., Dodson R, Brinkac LM, Daugherty SC, Deboy R, A. Durkin S, Giglio MGwinn et al..  2005.  Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition. Journal of bacteriologyJournal of bacteriology. 187
Joardar V, Lindeberg M, Jackson RW, Selengut J., Dodson R, Brinkac LM, Daugherty SC, Deboy R, A. Durkin S, Giglio MGwinn et al..  2005.  Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition. Journal of bacteriologyJournal of bacteriology. 187
Joardar V, Lindeberg M, Jackson RW, Selengut J., Dodson R, Brinkac LM, Daugherty SC, Deboy R, A. Durkin S, Giglio MGwinn et al..  2005.  Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition. Journal of bacteriologyJournal of bacteriology. 187
Joardar V, Lindeberg M, Jackson RW, Selengut J., Dodson R, Brinkac LM, Daugherty SC, Deboy R, A. Durkin S, Giglio MGwinn et al..  2005.  Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition. Journal of bacteriologyJournal of bacteriology. 187
2006
Attardo GM, Strickler-Dinglasan P, Perkin SAH, Caler E, Bonaldo MF, Soares MB, El-Sayeed N, Aksoy S.  2006.  Analysis of fat body transcriptome from the adult tsetse fly, Glossina morsitans morsitans.. Insect Mol Biol. 15(4):411-24.
Hotopp JCDunning, Lin M, Madupu R, Crabtree J, Angiuoli SV, Eisen JA, Eisen J, Seshadri R, Ren Q, Wu M et al..  2006.  Comparative genomics of emerging human ehrlichiosis agents. PLoS geneticsPLoS genetics. 2
Campbell MA, Haas BJ, Hamilton JP, Mount SM, C Buell R.  2006.  Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis.. BMC Genomics. 7:327.
Huq A, Grim C, Colwell RR, G. Nair B.  2006.  Detection, Isolation, and Identification of Vibrio cholerae from the Environment. Current Protocols in MicrobiologyCurrent Protocols in Microbiology.
Alam M., Sadique A., Bhuiyan N.A, Nair G.B, Siddique A.K, Sack D.A, Ahsan S., Huq A., Sack R.B, Colwell RR et al..  2006.  Effect of transport at ambient temperature on detection and isolation of Vibrio cholerae from environmental samples. Applied and environmental microbiologyApplied and environmental microbiology. 72
Bringaud F, Ghedin E, Blandin G, Bartholomeu DC, Caler E, Levin MJ, Baltz T, El‐Sayed NM.  2006.  Evolution of non-LTR retrotransposons in the trypanosomatid genomes: Leishmania major has lost the active elements. Molecular and Biochemical ParasitologyMolecular and Biochemical Parasitology. 145
Ross DA, Hannenhalli S, Tobias JW, Cooch N, Shiekhattar R, Kadesch T.  2006.  Functional Analysis of Hes-1 in Preadipocytes. Molecular EndocrinologyMolecular EndocrinologyMolecular EndocrinologyMolecular Endocrinology. 20
Colwell RR.  2006.  Microbial diversity in the era of genomics. SYMPOSIA-SOCIETY FOR GENERAL MICROBIOLOGY. 66
Baida RCP, Santos MRM, Carmo MS, Yoshida N, Ferreira D, Ferreira ATeixeira, Sayed NMEl, Andersson B, da Silveira JFranco.  2006.  Molecular Characterization of Serine-, Alanine-, and Proline-Rich Proteins of Trypanosoma cruzi and Their Possible Role in Host Cell Infection. Infect. Immun.Infect. Immun.. 74

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