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2009. PTM-Switchboard—a database of posttranslational modifications of transcription factors, the mediating enzymes and target genes. Nucleic acids researchNucleic Acids Research. 37
2002. Purification and properties of the extracellular lipase, LipA, of Acinetobacter sp. RAG‐1. European Journal of BiochemistryEuropean Journal of Biochemistry. 269
2014. Quantitative 4D analyses of epithelial folding during Drosophila gastrulation.. Development. 141(14):2895-900.
2012. Quantitative measurement of allele-specific protein expression in a diploid yeast hybrid by LC-MS.. Mol Syst Biol. 8:602.
2012. Quantitative measurement of allele-specific protein expression in a diploid yeast hybrid by LC-MS. Molecular Systems Biology. 8
2013. Quantitative PCR for Detection of Shigella Improves Ascertainment of Shigella Burden in Children with Moderate-to-Severe Diarrhea in Low-Income Countries. Journal of Clinical MicrobiologyJournal of Clinical Microbiology. 51
2004. A Rao-Blackwellized particle filter for eigentracking. Proceedings of the 2004 IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 2004. CVPR 2004.Proceedings of the 2004 IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 2004. CVPR 2004..
2015. Recognizing the 35th anniversary of the proposal that snRNPs are involved in splicing.. Mol Biol Cell. 26(20):3557-60.
2007. Recovery in culture of viable but nonculturable Vibrio parahaemolyticus: regrowth or resuscitation? The ISME JournalThe ISME journal. 1
2006. Recurring genomic breaks in independent lineages support genomic fragility. BMC Evolutionary BiologyBMC Evolutionary Biology. 6
2004. Reducing storage requirements for biological sequence comparison.. Bioinformatics. 20(18):3363-9.
2003. Reduction of Cholera in Bangladeshi Villages by Simple Filtration. Proceedings of the National Academy of SciencesPNASProceedings of the National Academy of SciencesPNAS. 100
2013. Re-evaluation of the Doriopsilla areolata Bergh, 1880 (Mollusca: Opisthobranchia) subspecies complex in the eastern Atlantic Ocean and its relationship to South African Doriopsilla miniata (Alder & Hancock, 1864) based on molecular data. Marine Biodiversity. 43(2):113-120.
2015. Regulated CRISPR Modules Exploit a Dual Defense Strategy of Restriction and Abortive Infection in a Model of Prokaryote-Phage Coevolution.. PLoS Comput Biol. 11(11):e1004603.
2010. Regulating the regulators: modulators of transcription factor activity. Methods Mol. BiolMethods Mol. Biol. 674
2011. Regulation of Lung Endoderm Progenitor Cell Behavior by miR302/367. DevelopmentDevelopmentDevelopmentDevelopment. 138
2001. Relating amino acid sequence to phenotype: analysis of peptide-binding data. BiometricsBiometrics. 57
2015. Relationships within Cladobranchia (Gastropoda: Nudibranchia) based on RNA-Seq data: an initial investigation. Royal Society Open Science. 23547143619757560685451171766(9):150196.
2014. Removing batch effects for prediction problems with frozen surrogate variable analysis.. PeerJ. 2:e561.
2011. Repetitive DNA and next-generation sequencing: computational challenges and solutions. Nature Reviews Genetics.
2009. Resistin gene variation is associated with systemic inflammation but not plasma adipokine levels, metabolic syndrome or coronary atherosclerosis in nondiabetic Caucasians. Clinical EndocrinologyClinical Endocrinology. 70
2008. Resolving arthropod phylogeny: exploring phylogenetic signal within 41 kb of protein-coding nuclear gene sequence. Syst BiolSyst Biol. 57
2006. Retroviral DNA integration: viral and cellular determinants of target-site selection. PLoS pathogensPLoS pathogens. 2
2009. Revealing biological modules via graph summarization. Journal of Computational BiologyJournal of Computational Biology. 16