Publications
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2009. InterPro: the integrative protein signature database. Nucleic acids researchNucleic Acids Research. 37
2009. InterPro: the integrative protein signature database. Nucleic acids researchNucleic Acids Research. 37
2009. InterPro: the integrative protein signature database. Nucleic acids researchNucleic Acids Research. 37
2009. InterPro: the integrative protein signature database. Nucleic acids researchNucleic Acids Research. 37
2009. Motifs and cis-regulatory modules mediating the expression of genes co-expressed in presynaptic neurons. Genome BiologyGenome Biology. 10
2009. Predicting the distribution of Vibrio spp. in the Chesapeake Bay: a Vibrio cholerae case study. EcoHealthEcoHealth. 6
2009. Resistin gene variation is associated with systemic inflammation but not plasma adipokine levels, metabolic syndrome or coronary atherosclerosis in nondiabetic Caucasians. Clinical EndocrinologyClinical Endocrinology. 70
2009. Salient Frame Detection for Molecular Dynamics Simulations. Scientific VisualizationScientific Visualization.
2009. Serogroup, Virulence, and Genetic Traits of Vibrio Parahaemolyticus in the Estuarine Ecosystem of Bangladesh. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 75
2009. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome BiologyGenome Biology. 10
2010. Diversity and distribution of cholix toxin, a novel ADP‐ribosylating factor from Vibrio cholerae. Environmental Microbiology ReportsEnvironmental Microbiology Reports. 2
2010. Effect on Human Cells of Environmental Vibrio Parahaemolyticus Strains Carrying Type III Secretion System 2. Infection and ImmunityInfect. Immun.Infection and ImmunityInfect. Immun.. 78
2010. Genetic and Physiological Activation of Osmosensitive Gene Expression Mimics Transcriptional Signatures of Pathogen Infection in C. elegans. PLoS ONEPLoS One. 5
2010. Hopx and Hdac2 Interact to Modulate Gata4 Acetylation and Embryonic Cardiac Myocyte Proliferation. Developmental CellDevelopmental Cell. 19
2010. Identification of Pathogenic Vibrio Species by Multilocus PCR-Electrospray Ionization Mass Spectrometry and Its Application to Aquatic Environments of the Former Soviet Republic of Georgia. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 76
2010. Identifying Differentially Abundant Metabolic Pathways in Metagenomic Datasets. Bioinformatics Research and ApplicationsBioinformatics Research and Applications. 6053
2010. MetaPhyler: Taxonomic profiling for metagenomic sequences. 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).
2010. A model for using a concept inventory as a tool for students' assessment and faculty professional development.. CBE Life Sci Educ. 9(4):408-16.
2010. Serodiversity and ecological distribution of Vibrio parahaemolyticus in the Venetian Lagoon, Northeast Italy. Environmental Microbiology ReportsEnvironmental Microbiology Reports. 2
2010. Tackling the widespread and critical impact of batch effects in high-throughput data. Nature reviews. GeneticsNature reviews. Genetics. 11
2010. Tackling the widespread and critical impact of batch effects in high-throughput data. Nature reviews. GeneticsNature reviews. Genetics. 11