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White JRobert, Nagarajan N, Pop M..  2009.  Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples. PLoS Comput BiologyPLoS Comput BiolPLoS Comput BiologyPLoS Comput Biol. 5
Molden RC, Goya J, Khan Z, Garcia BA.  2014.  Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination.. Mol Cell Proteomics. 13(4):1106-18.
Revett K., Ruppin E., Goodall S., Reggia JA.  1998.  Spreading depression in focal ischemia: A computational study. Journal of Cerebral Blood Flow & MetabolismJournal of Cerebral Blood Flow & Metabolism. 18
Mount SM, Burks C, Hertz G, Stormo GD, White O, Fields C.  1992.  Splicing signals in Drosophila: intron size, information content, and consensus sequences.. Nucleic Acids Res. 20(16):4255-62.
Padgett RA, Mount SM, Steitz JA, Sharp PA.  1983.  Splicing of messenger RNA precursors is inhibited by antisera to small nuclear ribonucleoprotein.. Cell. 35(1):101-7.
Dogan RIslamaj, Getoor L, W Wilbur J, Mount SM.  2007.  SplicePort--an interactive splice-site analysis tool.. Nucleic Acids Res. 35(Web Server issue):W285-91.
Dogan R.I, Getoor L, Wilbur W.J, Mount SM.  2007.  SplicePort--An interactive splice-site analysis tool. Nucleic Acids ResearchNucleic Acids Research. 35
Mount SM, Gotea V, Lin C-F, Hernandez K, Makalowski W.  2007.  Spliceosomal small nuclear RNA genes in 11 insect genomes.. RNA. 13(1):5-14.
Patro R., Dickerson J.P, Bista S., Gupta S.K, Varshney A.  2012.  Speeding Up Particle Trajectory Simulations under Moving Force Fields using GPUs. Journal of Computing and Information Science in EngineeringJournal of Computing and Information Science in Engineering.
Guo M, Lo PC, Mount SM.  1993.  Species-specific signals for the splicing of a short Drosophila intron in vitro.. Mol Cell Biol. 13(2):1104-18.
Nickerson ML, Im KM, Misner KJ, Tan W, Lou H, Gold B, Wells DW, Bravo HCorrada, Fredrikson KM, Harkins TT et al..  2013.  Somatic alterations contributing to metastasis of a castration-resistant prostate cancer. Human mutationHuman mutation. 34
Patro R., Ip CYiu, Bista S., Varshney A.  2011.  Social Snapshot: A System for Temporally Coupled Social Photography. Computer Graphics and Applications, IEEEComputer Graphics and Applications, IEEE. 31
Steitz JA, Wolin SL, Rinke J, Pettersson I, Mount SM, Lerner EA, Hinterberger M, Gottlieb E.  1983.  Small ribonucleoproteins from eukaryotes: structures and roles in RNA biogenesis.. Cold Spring Harb Symp Quant Biol. 47 Pt 2:893-900.
Cummings MP, King L.M, Kellogg E.A.  1994.  Slipped-strand mispairing in a plastid gene: ıt rpoC2 in grasses (Poaceae). Mol Biol EvolMol Biol Evol. 11
Selengut JD, Rusch DB, Haft DH.  2010.  Sites Inferred by Metabolic Background Assertion Labeling (SIMBAL): adapting the Partial Phylogenetic Profiling algorithm to scan sequences for signatures that predict protein function.. BMC Bioinformatics. 11:52.
Selengut J., Rusch DB, Haft DH.  2010.  Sites Inferred by Metabolic Background Assertion Labeling (SIMBAL): adapting the Partial Phylogenetic Profiling algorithm to scan sequences for signatures that predict protein function. BMC bioinformaticsBMC Bioinformatics. 11
Dillon LAL, Suresh R, Okrah K, Bravo HCorrada, Mosser DM, El-Sayed NM.  2015.  Simultaneous transcriptional profiling of Leishmania major and its murine macrophage host cell reveals insights into host-pathogen interactions.. BMC Genomics. 16(1):1108.
Cummings MP, Myers D.S.  2004.  Simple statistical models predict C-to-U edited sites in plant mitochondrial RNA. BMC BioinformaticsBMC Bioinformatics. 5
Choopun N, Louis V, Huq A, Colwell RR.  2002.  Simple Procedure for Rapid Identification of Vibrio Cholerae from the Aquatic Environment. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 68
Zo Y-G, Colwell RR.  2008.  A simple binomial test for estimating sequencing errors in public repository 16S rRNA sequences. Journal of Microbiological MethodsJournal of Microbiological Methods. 72
Borah M., Bajwa R.S, Hannenhalli S, Irwin M.J.  1994.  A SIMD solution to the sequence comparison problem on the MGAP. International Conference on Application Specific Array Processors, 1994. Proceedings.
Colwell RR.  2008.  Silent Sputnik. BioScienceBioScience. 58
Pop M..  2004.  Shotgun Sequence Assembly. Advances in ComputersAdvances in Computers. Volume 60
Okrah K, Bravo HCorrada.  2015.  Shape analysis of high-throughput transcriptomics experiment data.. Biostatistics. 16(4):627-40.
Nagengast AA, Stitzinger SM, Tseng C-H, Mount SM, Salz HK.  2003.  Sex-lethal splicing autoregulation in vivo: interactions between SEX-LETHAL, the U1 snRNP and U2AF underlie male exon skipping.. Development. 130(3):463-71.