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E
Furnier G.R, Cummings MP, Clegg M.T.  1990.  Evolution of avocados as revealed by DNA restriction fragment variation. J HeredJ Hered. 81
Faruque SM, Sack DA, R. Sack B, Colwell RR, Takeda Y, G. Nair B.  2003.  Emergence and Evolution of Vibrio Cholerae O139. Proceedings of the National Academy of SciencesPNASProceedings of the National Academy of SciencesPNAS. 100
Field D, Garrity G, Morrison N, Selengut J., Sterk P, Tatusova T, Thomson N.  2005.  eGenomics: Cataloguing our Complete Genome Collection. Comparative and functional genomicsComparative and functional genomics. 6
D
Fernandes MCecilia, Dillon LAL, Belew ATrey, Bravo HCorrada, Mosser DM, El-Sayed NM.  2016.  Dual Transcriptome Profiling of Leishmania-Infected Human Macrophages Reveals Distinct Reprogramming Signatures. mBio. 7(3):e00027-16.
Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KLT et al..  2008.  The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).. Nature. 452(7190):991-6.
Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KLT et al..  2008.  The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).. Nature. 452(7190):991-6.
Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KLT et al..  2008.  The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).. Nature. 452(7190):991-6.
Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KLT et al..  2008.  The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).. Nature. 452(7190):991-6.
Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KLT et al..  2008.  The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).. Nature. 452(7190):991-6.
Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, De Tomaso A, Davidson B, Di Gregorio A, Gelpke M, Goodstein DM et al..  2002.  The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins.. Science. 298(5601):2157-67.
Kirkness E.F, Bafna V., Halpern A.L, Levy S., Remington K., Rusch D.B, Delcher A.L, Pop M., Wang W., Fraser C.M et al..  2003.  The dog genome: survey sequencing and comparative analysis. ScienceScience. 301
Liu B., Faller L.L, Klitgord N., Mazumdar V., Ghodsi M., Sommer D.D, Gibbons T.R, Treangen T, Chang Y.C, Li S. et al..  2012.  Deep Sequencing of the Oral Microbiome Reveals Signatures of Periodontal Disease. PloS onePLoS One. 7
C
El‐Sayed NM, Patton C.L, Harkins P.C, Fox R.O, Anderson K..  1995.  Crystallization and preliminary X-ray investigation of the recombinant Trypanosoma brucei rhodesiense calmodulin. Proteins: Structure, Function, and BioinformaticsProteins: Structure, Function, and Bioinformatics. 21
He X, Chatterjee R, John S, Bravo H, Sathyanarayana BK, Biddie SC, FitzGerald PC, Stamatoyannopoulos JA, Hager GL, Vinson C.  2013.  Contribution of nucleosome binding preferences and co-occurring DNA sequences to transcription factor binding. BMC Genomics. 14(1):428.
Yizhak K, Le Dévédec SE, Rogkoti VMaria, Baenke F, de Boer VC, Frezza C, Schulze A, van de Water B, Ruppin E.  2014.  A computational study of the Warburg effect identifies metabolic targets inhibiting cancer migration.. Mol Syst Biol. 10:744.
Treangen TJ, Maybank RA, Enke S, Friss MBeth, Diviak LF, Karaolis DKR, Koren S, Ondov B, Phillippy AM, Bergman NH.  2014.  Complete genome sequence of the quality control strain Staphylococcus aureus subsp. aureus ATCC 25923. Genome announcements. 2:e01110–14.
C. Buell R, Joardar V, Lindeberg M, Selengut J., Paulsen IT, Gwinn ML, Dodson RJ, DeBoy RT, A. Durkin S, Kolonay JF et al..  2003.  The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Proceedings of the National Academy of Sciences of the United States of AmericaProceedings of the National Academy of Sciences of the United States of America. 100
C. Buell R, Joardar V, Lindeberg M, Selengut J., Paulsen IT, Gwinn ML, Dodson RJ, DeBoy RT, A. Durkin S, Kolonay JF et al..  2003.  The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Proceedings of the National Academy of Sciences of the United States of AmericaProceedings of the National Academy of Sciences of the United States of America. 100
C. Buell R, Joardar V, Lindeberg M, Selengut J., Paulsen IT, Gwinn ML, Dodson RJ, DeBoy RT, A. Durkin S, Kolonay JF et al..  2003.  The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Proceedings of the National Academy of Sciences of the United States of AmericaProceedings of the National Academy of Sciences of the United States of America. 100
Di Bonaventura MPia, DeSalle R, Pop M., Nagarajan N, Figurski DH, Fine DH, Kaplan JB, Planet PJ.  2009.  Complete Genome Sequence of Aggregatibacter (Haemophilus) Aphrophilus NJ8700. Journal of BacteriologyJ. Bacteriol.Journal of BacteriologyJ. Bacteriol.. 191
Di Bonaventura MPia, DeSalle R, Pop M., Nagarajan N, Figurski DH, Fine DH, Kaplan JB, Planet PJ.  2009.  Complete Genome Sequence of Aggregatibacter (Haemophilus) Aphrophilus NJ8700. Journal of BacteriologyJ. Bacteriol.Journal of BacteriologyJ. Bacteriol.. 191
Nelson K.E, Weinel C., Paulsen I.T, Dodson R.J, Hilbert H., Santos V.APMart, Fouts D.E, Gill S.R, Pop M., Holmes M. et al..  2003.  Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440. Environmental MicrobiologyEnvironmental Microbiology. 5
Enk J, Devault A, Debruyne R, King CE, Treangen T, O'Rourke D, Salzberg SL, Fisher D, MacPhee R, Poinar H.  2011.  Complete Columbian mammoth mitogenome suggests interbreeding with woolly mammoths. Genome biology. 12:R51.
Seshadri R, Myers GSA, Tettelin H, Eisen JA, Heidelberg JF, Dodson RJ, Davidsen TM, DeBoy RT, Fouts DE, Haft DH et al..  2004.  Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes. Proceedings of the National Academy of Sciences of the United States of AmericaProceedings of the National Academy of Sciences of the United States of America. 101
Seshadri R, Myers GSA, Tettelin H, Eisen JA, Heidelberg JF, Dodson RJ, Davidsen TM, DeBoy RT, Fouts DE, Haft DH et al..  2004.  Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes. Proceedings of the National Academy of Sciences of the United States of AmericaProceedings of the National Academy of Sciences of the United States of America. 101

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